KEGG   Pectobacterium brasiliense: B5S52_04925
Entry
B5S52_04925       CDS       T06364                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
pbra  Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbra03016]
    B5S52_04925
Enzymes [BR:pbra01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     B5S52_04925
Transfer RNA biogenesis [BR:pbra03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    B5S52_04925
 Prokaryotic type
    B5S52_04925
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ARA75267
UniProt: A0A3S0XJU4
Position
1076793..1077839
AA seq 348 aa
MENNEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFQPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFVRLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSSLALEGCDVLEVTRHRRK
LRIGTLRGNHFTLVLRQVSDRNEVDARLALIAANGAPNYFGSQRFGRNGNNLEQARLWAN
NEIRVKERSKRSFYLSASRSAMFNQVASARLAEQKAKTVLCGDALQLTGRGSWFVAKPDE
LDVLQTRLDAGELQITAPLPGDGELGTQDDARVFEEQALLGQDTLWSLIKRERVEPARRA
VLLYPQQMHWEWQDDATVEVKFWLPAGSFATSVVRELLHSQQDTDLGA
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggaaaataacgaacaactcgtctggttgcacggtgaaccacaggctactggctcattg
aaatccactgctgaagattttctggtggtggaagatctggggtttcagccagatggtgac
ggtgagcaggtattggtgcgcgtgcgcaaacgcggttgcaatacgcaatttgtggccgag
atgctggcgaaatttgttcgtctaccgctgcgtgccgttagctatgcgggcctgaaagat
cgtcatgctgtcaccgaacagtggttctgcctgcacatgccgggaaaagagacgcctgat
ttctcctcgctggcgcttgaaggctgtgatgtgcttgaggtgactcgccatcgtcgcaag
ctgcggatcggtacgctgcgaggtaaccattttacgctggtgctgcgtcaggttagcgac
cgaaacgaggtcgacgcgcgtttggcgctgatcgccgcgaacggcgcacctaattatttc
ggcagccagcgtttcgggcgcaacggaaataatcttgagcaggctcgtctttgggcaaat
aacgagattcgggtaaaagaacgcagtaagcggagtttttatctttccgccagccgcagt
gcgatgtttaatcaggttgccagtgcacgactcgcggagcagaaggcgaaaacggtcttg
tgtggtgatgcattgcagctaacagggcgcggcagctggtttgttgctaagcccgatgaa
ttagacgttttacagacgcgccttgatgcgggcgaactccagattaccgcgccgctgcct
ggtgatggtgaactgggcacgcaggatgacgcgcgggtatttgaagaacaggctttgctc
ggacaagacacgctgtggtctttgattaagcgtgagcgggtcgaacctgcccggcgtgcg
gtgctgctgtatccgcagcagatgcactgggaatggcaggacgatgcgaccgtggaagtg
aagttttggctacctgcgggcagttttgcgaccagcgtggtgcgtgaattgctacattca
cagcaggataccgatctcggggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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