KEGG   Pectobacterium brasiliense: B5S52_12565
Entry
B5S52_12565       CDS       T06364                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pbra  Pectobacterium brasiliense
Pathway
pbra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B5S52_12565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbra03400]
    B5S52_12565
Enzymes [BR:pbra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B5S52_12565
DNA repair and recombination proteins [BR:pbra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B5S52_12565
    RecFOR pathway proteins
     B5S52_12565
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase AAA_22 AAA_3 AAA_16 TIP49 nSTAND3 AAA_14 Rad17 AAA_18 AAA_2 AAA_17 NTPase_1 RNA_helicase Bac_DnaA AAA_24 AAA_28 TsaE NB-ARC bpMoxR ABC_tran
Other DBs
NCBI-ProteinID: ARA76667
Position
complement(2775450..2776460)
AA seq 336 aa
MIEADRLISADAVPEEEFIDRAIRPKLLNEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYKVEDLQYIVSRSAQCLGLDLTSEGALEVARRARGTPRIANRLLRRVRDFSEVKSEG
AITGDVATQALDMLAVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREDLN
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgatagaagccgatcgtttaatctccgctgacgccgttcccgaagaagaatttatcgac
cgtgcgatccgccctaaattgctcaacgagtatgtggggcagccgcaggtgcgtgagcag
atggaaatttttattcaggcggcccgtaaacgcggggatgcgctggaccatctgctcatt
tttggtcctcccggtctggggaaaacgacgctggcgaatattgtcgctaatgaaatgggc
gtgaatatgcgcacgacgtcgggcccggtgctggaaaaagccggcgatctcgccgcgctg
ctgactaatctcgaaccgcatgatgtactgttcatcgatgaaatccatcgcctgtcgccc
gttgtggaagaagtgctgtatccggcgatggaagactatcagttggatatcatgatcggc
gaagggccggccgcccgttcgatcaaactcgatttgccgcctttcacgctggttggtgca
acaacgcgtgctggctcgttaacctcgccgctgcgtgatcgtttcggcattgtgcagcgc
ctggagttttataaagttgaggatttgcagtatatcgtcagccgcagcgcacagtgtcta
gggctggatctgacatccgagggcgcgcttgaagtggcgcggcgcgcgcggggaacgccg
cgtattgccaaccgactattaagacgggtgcgcgatttctccgaagttaaatcggaaggg
gcgattaccggtgatgtggcgacgcaggcgctggatatgctggcggtggatagcgaaggt
tttgactacatggaccgtaagctgctgttggcgatcatcgataaatttatgggtggtccc
gttgggctggacaatttagcggcagcgattggcgaagagcgtgaaaccattgaagacgtg
ctggagccgtttctgattcagcaagggttcattcagcgtacgccgcgcggtcgaatggcg
acgcaacatgcctatcgtcattttggcttaacgcgtgaagatttaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (25)   
   Pfam (25)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system