KEGG   Pectobacterium brasiliense: B5S52_13515
Entry
B5S52_13515       CDS       T06364                                 
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
pbra  Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pbra03009]
    B5S52_13515
Enzymes [BR:pbra01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     B5S52_13515
Ribosome biogenesis [BR:pbra03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    B5S52_13515
SSDB
Motif
Pfam: PseudoU_synth_2 S4 JAKMIP_CC3 DUF4082 Herpes_ORF11
Other DBs
NCBI-ProteinID: ARA76847
UniProt: A0A086EZ03
Position
complement(2993222..2993917)
AA seq 231 aa
MRLDKFLSQQLEISRSLVARELHAQRVTVDGEVVKSGAFKLSPEHNVEFDGNPLKQQNGP
RYFMLNKPQGYVCSTDDPDHPTILYFMDVPVAYKLHAAGRLDIDTTGLVLLTDDGQWSHR
ITSPKHQCEKTYLVTLEQPLAEDTAAQFTAGVQLHNEKNLTKPATLEKITDYVVRLTISE
GRYHQVKRMFAAVGNRVVELHRERIGGIYLDSELEPGEYRELSAEEIASVK
NT seq 696 nt   +upstreamnt  +downstreamnt
atgcgattggacaaatttttatcccagcagttggaaattagtcgttcactggtggcgcgc
gagctccacgcacagcgtgttaccgtcgatggtgaagtggtaaaaagcggtgcgttcaag
ttatcccccgagcataacgttgaatttgatggtaacccgttgaaacagcagaacggccca
cgttatttcatgttgaataagcctcagggctacgtttgttcaacggacgatcccgatcat
cccaccattttgtatttcatggatgtcccggtggcgtacaaactgcacgcggcggggcgt
ctggatatcgataccactggactggtactgctaactgacgacggacaatggtcgcatcgc
attacctcgcctaagcatcagtgtgaaaaaacgtatctggtgacgctggaacagccgctg
gctgaggacaccgctgcgcaatttacggcgggcgtgcaactgcataacgagaagaacctc
accaaacccgctacgcttgagaagataacggattatgtcgttcgactgacgattagtgaa
ggccgctatcatcaggtcaaaaggatgtttgcggcagtggggaatcgggttgttgagctg
catcgcgaacgtatcggtggcatctatctggatagcgaactggaaccgggggaataccgg
gagttaagtgctgaggagatcgccagcgtaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system