KEGG   Pectobacterium brasiliense: B5S52_20445
Entry
B5S52_20445       CDS       T06364                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
pbra  Pectobacterium brasiliense
Pathway
pbra00250  Alanine, aspartate and glutamate metabolism
pbra00310  Lysine degradation
pbra00350  Tyrosine metabolism
pbra00650  Butanoate metabolism
pbra00760  Nicotinate and nicotinamide metabolism
pbra01100  Metabolic pathways
pbra01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    B5S52_20445 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    B5S52_20445 (gabD)
   00310 Lysine degradation
    B5S52_20445 (gabD)
   00350 Tyrosine metabolism
    B5S52_20445 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    B5S52_20445 (gabD)
Enzymes [BR:pbra01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     B5S52_20445 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     B5S52_20445 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     B5S52_20445 (gabD)
SSDB
Motif
Pfam: Aldedh DUF1487
Other DBs
NCBI-ProteinID: ARA78116
Position
complement(4559608..4561062)
AA seq 484 aa
MSGQNLQDHELFKTGYFAAGKWQQSGATFEVVNPATGESIASVAKAGKKETQAAIDAAYA
AFPAWKRKTAKERSEILYRWYELILENKRYLAELMTAEQGKPVQEAEGEVVYAANFIQWF
AEQGKRANGEIIPPAKPGSKIYATREPVGVVVAITPWNFPLAMLTRKLGPALAAGCTGVI
KPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTEVGK
TLVRNAADTMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQD
GVYDEFVSLLAEEVKKLKVGNGMDDGVVLGPLIDDAAVEKVEKHVNDAVEKGGKALVGGK
RHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKTEEEVIQRANNTPFGLAAYFY
SQNLQRVFRVADALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH
LGGL
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcaggacaaaatttgcaggatcatgaactgttcaaaacgggctactttgctgcgggg
aaatggcagcagagcggcgctaccttcgaggtcgtcaatccggcgacgggcgagtcgatt
gccagcgtggcgaaagcgggaaagaaagagacgcaggcggcgattgacgctgcctatgcc
gcgtttcctgcctggaagcgcaaaaccgcgaaagaacgttctgaaattctgtatcgctgg
tacgaactgattctggaaaataaacgctatctggcggagctgatgaccgccgaacagggc
aagcctgtgcaggaagccgaaggtgaagtcgtctacgcggcgaatttcattcagtggttt
gctgagcagggcaagcgagctaacggtgagattattccgccagctaaacccggatcgaag
atttacgccacgcgtgaacccgttggcgtcgttgttgccattacgccgtggaatttcccg
ctggcgatgctgacgcgtaagctgggaccggcgctggccgcaggatgtactggcgtgatc
aaacccgccaacaacacgccgctgtctgcgtttgcgctgttggcgctggcgcagcaggcg
ggtgtgccggatggcgtactcaacggcgtggcgggcgacacgcaggcgatcagcgatacc
gtcatggcgagcgataaagtgcgcaaaatttccttcactggttcgactgaagtagggaaa
acgctggtgcgcaacgccgcagatacgatgaagaaagtgtcgatggaactgggcggcaac
gcgccttatatcgtgtttgatgacgcagatattcaggccgcagtaaaaggcgcgatagct
aaccgtttccgtaacgcaggtcaggtctgtgttagcgccaaccggttttatattcaggac
ggcgtctacgatgagtttgtctctttgcttgcggaagaagtgaagaagctgaaagtcggt
aacggtatggatgacggcgtcgtgctcggtccgctgattgacgatgctgcggtcgagaag
gtggaaaagcacgtcaatgacgcggtggaaaagggaggcaaggcgcttgtcggtggtaaa
cggcacaagctgggccacagcttctttgagccgacggtgattgttgatgccaacgaagcg
atgctgctggcacaggaagaaacatttggtccggtcgcgccctgcttccgcttcaaaacg
gaagaagaggtgattcagcgcgccaacaatacgccgtttgggctggccgcctacttctac
agccagaatttgcagcgtgtgttccgcgtggcagacgcgctggagagcggcatgattggt
attaacgaatgcgcggtttcaactgaattagcccccttcggcggtgtgaaagagtcagga
ttaggccgcgaaggctcggttctggggctggacgaatttctggaagtgaaaacctggcat
ttgggcgggttgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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