KEGG   Rubinisphaera brasiliensis: Plabr_4556
Entry
Plabr_4556        CDS       T01431                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pbs  Rubinisphaera brasiliensis
Pathway
pbs00470  D-Amino acid metabolism
pbs00550  Peptidoglycan biosynthesis
pbs01100  Metabolic pathways
pbs01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pbs00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Plabr_4556
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Plabr_4556
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Plabr_4556
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pbs01011]
    Plabr_4556
Enzymes [BR:pbs01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Plabr_4556
Peptidoglycan biosynthesis and degradation proteins [BR:pbs01011]
 Precursor biosynthesis
  Amino acid ligase
   Plabr_4556
SSDB
Motif
Pfam: Dala_Dala_lig_C GARS_A ATP-grasp_3 ATP-grasp_4
Other DBs
NCBI-ProteinID: ADY62127
UniProt: F0SME8
Position
complement(5657101..5658090)
AA seq 329 aa
MLIGFTYDLRDDYLAEGYGELETAEFDRVDTIDAIVDALVACGHEVDRIGRAKQLVHRLA
DGCSWDLVFNISEGLRGLSRESQVPSILDVYEIPYTFSDPLTLSVCLHKELTKQVVARAG
ILTPASLLVSQLSDLDRLHLQFPLFAKPVAEGTGKGVTPASCVNSFNELHSVCLQLLTEF
EQPVLVESFLPGREFTVGILGTGEAARVVGTLEIVLREAAEVGVYSYVNKERCEDLVDYV
PVNGHDDAEVRQAEELALTAWRALGCRDGGRIDVRSDSHGRPNFIEANPLAGLHPHHSDL
PMIATAVGMTYVDLIDQIVTSAAERTVLA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgttaattggtttcacttacgacctgcgcgacgattacctggccgaaggctacggcgaa
ctcgaaaccgcggagttcgatcgcgtcgataccattgatgccattgttgacgctttggtc
gcctgcggccacgaagtggaccggatcggccgggccaagcagctggtacatcgtctggcc
gacggctgcagctgggatttagtgttcaacatcagtgaaggactgcggggcctgtcgcgt
gaatcacaggttccttcgattctcgatgtctatgaaattccctacaccttttccgatccg
ctcacgctgtcggtctgcctgcacaaagaactgacgaaacaggtcgttgcccgagcggga
attctcaccccggcttcgctgctggtgtcgcagctgtccgatctcgatcgcctgcatctg
caatttccgttgtttgccaaaccggtagcggaaggaaccgggaaaggggtcacccccgcg
tcctgcgtgaactccttcaacgagttgcatagcgtgtgtctgcagctgttgaccgaattt
gaacaaccggtgcttgtcgagagtttcctgcccggtcgcgaattcacggttggcattctc
ggaaccggcgaagctgctcgggtggtcggcacactcgaaattgtgctgcgggaagcggcc
gaagtgggcgtctattcgtacgtcaataaagagcgttgcgaagatctggttgactacgtt
ccggtcaacgggcacgacgatgccgaagtgcgccaggcggaagaattggcgttgacggcc
tggcgtgctcttggctgtcgcgacggcggacggatcgacgttcgttctgacagccacggc
cgaccgaactttatcgaagcgaatccgctggcgggattacatccgcatcactctgatctg
ccgatgatcgcgaccgctgtagggatgacctacgttgatttgattgatcagattgtgact
tctgcagcagagcggaccgttcttgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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