KEGG   Fermentimonas caenicola: ING2E5B_0100
Entry
ING2E5B_0100      CDS       T03818                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pbt  Fermentimonas caenicola
Brite
KEGG Orthology (KO) [BR:pbt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbt03032]
    ING2E5B_0100
   03400 DNA repair and recombination proteins [BR:pbt03400]
    ING2E5B_0100
Enzymes [BR:pbt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ING2E5B_0100
DNA replication proteins [BR:pbt03032]
 Prokaryotic type
  DNA Topoisomerases
   ING2E5B_0100
DNA repair and recombination proteins [BR:pbt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ING2E5B_0100
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: CEA14786
UniProt: A0A098BXI3
Position
chrI:complement(97531..98550)
AA seq 339 aa
MAAKSKLAYVEKIENGGIFREKRGKGFRYICEGVKVTDTVTLNRIHRLVIPPAWKEVWIC
SMVNGHIQATGIDAMGRKQYIYHTEWVNQRDKRKYHRMIQFAYALPKIRLQIEKDLSRKG
LPKEKVLALIISLMERTSIRVGNNTYEKLYGSFGLTTLKDKHTEIKGSDIKFSFKGKKGV
YHDINLRNSRLARMVQRCKEIPGKELFQYYDDEGKRQSIDSGMVNDYLKEISGEEFTSKD
FRTWAGTVKAFLAFKELGCGGSESEKKRLITEAVDKVATKLGNTRAVCKKYYIHPEIITS
YENGALQEYFDQLDAIEEDDNYSDLTKEEKIVLSILENK
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcagcaaaatctaagcttgcatatgtcgagaagatcgagaatggaggaatatttcgt
gaaaaaaggggaaaaggattcagatatatttgtgaaggagttaaagttactgacacagtt
accctcaacagaattcaccgacttgtaattcctcctgcatggaaagaagtatggatatgc
tcaatggttaatggtcacatacaggccactggcattgatgcaatggggcgtaaacagtat
atctatcatactgagtgggtaaatcagagagataagagaaaatatcacaggatgattcag
tttgcctatgccctgcctaaaataagattacagattgagaaagatctgtcacgtaaaggt
ttgccaaaggagaaagtgctggctcttataatcagccttatggagcgcacaagcatacga
gttggcaataatacatacgaaaaactatatggatcattcggacttaccacccttaaggat
aagcataccgaaataaagggaagcgatatcaaattttcattcaaagggaagaagggggtt
taccatgatataaatttacgtaacagccggcttgcacgcatggttcaaagatgtaaagag
attccaggcaaggagctttttcagtattacgatgatgagggaaagcgtcaatctatcgac
tcaggtatggtaaacgactacctaaaagagataagtggcgaggagttcacttctaaagat
ttcagaacctgggcaggaacagtaaaagcatttctcgcgttcaaggaacttggttgtggt
ggatcagaatcagaaaaaaagaggctaataacagaggctgttgataaggttgccacaaag
ttgggaaatactcgtgcagtttgtaaaaaatactacatccatcccgaaattatcacctct
tacgagaatggtgctctacaagagtattttgatcagcttgatgcaattgaagaggatgat
aattattcggatcttacaaaagaggagaaaattgtactatctattttagagaataaatga

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