KEGG   Paenibacillus bovis: AR543_15325
Entry
AR543_15325       CDS       T04407                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pbv  Paenibacillus bovis
Pathway
pbv02024  Quorum sensing
pbv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AR543_15325
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AR543_15325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbv03019]
    AR543_15325
   03036 Chromosome and associated proteins [BR:pbv03036]
    AR543_15325
Messenger RNA biogenesis [BR:pbv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AR543_15325
Chromosome and associated proteins [BR:pbv03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AR543_15325
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: ANF97235
UniProt: A0A172ZHX5
Position
complement(3637792..3638031)
AA seq 79 aa
MNKSINIQDTFLNQLRKENIPVTVYLVNGFQIRGTIKAFDNFTIMVDSEGRQQMIYKHAV
STFTPSRNVSLMQDNQSEG
NT seq 240 nt   +upstreamnt  +downstreamnt
atgaacaagtcgattaatatccaggatacttttttaaatcaactgcgcaaggaaaatatt
ccggtaactgtgtatctggtaaatggttttcaaatccgtggtacaatcaaggcttttgac
aactttaccattatggtagacagtgaaggacgccagcaaatgatctacaaacatgcggtt
tccaccttcacaccatcgcgcaacgtatccctcatgcaggataaccaaagcgaaggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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