KEGG   Pseudoalteromonas sp. Bsw20308: D172_007090
Entry
D172_007090       CDS       T04175                                 
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pbw03009]
    D172_007090 (yebU)
Enzymes [BR:pbw01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     D172_007090 (yebU)
Ribosome biogenesis [BR:pbw03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    D172_007090 (yebU)
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltr_RsmF_N Methyltranf_PUA YebU_pre-PUA_dom Methyltransf_31 RsmF_methylt_CI TruB-C_2
Other DBs
NCBI-ProteinID: ALQ09729
Position
complement(1643441..1644892)
AA seq 483 aa
MNANTFIPEHFIDDVKTYLPAHLNLDDFLNACRRPLRKSIRVNTLKISIEEFVERATEKK
WLLTPIPWCSEGFWLERPSDEEQNLALGNTDLHLSGAMYVQEASSMLPPIALKQSIELTG
TQNNTVLDMASAPGSKTSQLAALMNNQGVLVANELSSSRLKVLSATLKRMGVGNCALSHF
DGVIFGNYMFECFDSILLDAPCSGEGTVRKDADALKNWSIESNIQIAQVQKDLIKSAFYA
LKPGGTLVYSTCTLTPLENQQVCDYLLSEFGDYIEPQSLSDLFEGASEAKTNEGYLHVWP
QTFDSEGFFIAKFKKHASCDNPNQTVKKGAFPFNEFDKKQSAAFMQSLKKHFELTNLPGN
LMQRDKELWLFPQGFEAVQNKIKYARLGIQIGIIHKNGVRLTHEFATVFGNECKTNVFAL
NNEQANDYFQGKDIRLTEATQTIGEVVLTLCGCPIGLGKWQKNKIKNSLPRDLVQNTQLI
SWV
NT seq 1452 nt   +upstreamnt  +downstreamnt
gtgaacgccaacacttttattcctgagcactttattgatgacgtaaaaacctatttacca
gcgcatctaaacttagatgactttttaaatgcgtgtcgcaggccactcagaaaatctatc
cgcgttaatacattaaaaattagcattgaagaatttgtagaacgtgcaactgaaaaaaaa
tggctgctaacccccatcccttggtgcagtgaaggcttttggttagaacgcccaagcgat
gaagagcaaaacctagccctcggtaataccgacttacacctaagcggtgcgatgtacgta
caagaagcaagttcaatgctgccgcctattgccttaaagcaaagtattgaactcacaggc
actcaaaataacaccgtgcttgatatggcatcagcgccgggctctaaaacctcacagcta
gctgcgcttatgaataaccaaggcgtgcttgttgcaaatgagctttcgtcatctcgttta
aaggtacttagcgccaccttaaaacgcatgggggtcggtaactgtgcgctttcgcacttt
gatggcgttatatttggcaactacatgtttgaatgctttgacagcatattattagacgcg
ccctgctctggcgaaggtactgtgcgtaaagacgccgacgcactaaaaaattggtcaata
gaatcaaacatacaaatagcccaagtacaaaaagacttaattaaaagcgcattttacgca
ttaaagccaggtggcacgttagtgtattcaacctgtacacttactccgctcgaaaaccag
caagtatgcgattatttactcagtgaatttggcgactatatagagccacaatccctaagt
gatttatttgaaggtgcaagcgaagccaaaactaatgagggctatttacatgtatggccg
caaaccttcgatagcgaaggcttttttattgctaaatttaaaaagcacgcaagttgcgat
aacccaaatcaaactgttaaaaaaggcgcgtttccgtttaacgagtttgataaaaagcaa
agtgccgcgtttatgcagtcgcttaaaaagcactttgagttaactaatcttcctggtaac
ttaatgcagcgcgacaaagagctgtggttatttccacaagggtttgaagccgtgcaaaat
aaaattaagtacgcacgcttaggtattcaaattggcattattcataaaaatggcgtaagg
ctaacgcacgagtttgcaaccgtatttggcaatgagtgtaaaactaatgtatttgcttta
aataacgagcaagcaaatgattattttcaaggtaaagatatacgcttaactgaagcaact
cagacaataggtgaggtggtattaactctgtgtgggtgccctattgggctgggaaaatgg
caaaaaaataagattaaaaactcactgccgcgagatctcgtgcaaaatacgcagttaata
agctgggtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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