KEGG   Pseudoalteromonas sp. Bsw20308: D172_014420
Entry
D172_014420       CDS       T04175                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
pbw  Pseudoalteromonas sp. Bsw20308
Pathway
pbw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D172_014420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbw03019]
    D172_014420
Enzymes [BR:pbw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     D172_014420
Messenger RNA biogenesis [BR:pbw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     D172_014420
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ALQ09141
Position
3260863..3262284
AA seq 473 aa
MTSQSTPSRRQTIISKLFQFCRQIIGPNTSAKSASVSSEPIVVTRGEHGISRKQFSPNAI
KVLYRLKDGGYDAYLVGGCIRDILLGQQPKDFDVVTNATPDQVKKLFRNCRLIGRRFRLA
HIVFGREIIEVATMRGHHEAPEDKNQISQSSDQGQLLRDNVFGSIEEDAERRDFSINALY
YSINDFSIHDYANGLAAIKAKQIELIGDPETRYREDPVRMLRAVRFATKLDMSIAPKSEK
PITELASLLDNIPPARLFEEVLKLFLNGKAEANFLMLRKYGLFKSLFPDLDSILNKKPGG
LEHTLVQQMFQNTDERINADKKVTPAFIFAALLWFPLLARTKEIQEQEQLVEYDAFAQAM
NKVLSDSAQHIAVPKRFTLGARDIWHIQHRLDKRAGQRAYRLTQQPRFKAAYDFLLLRVD
AGETQHTELAQWWTQYLGQDINGQKEMVKNLGHPGGPKPRKRTRRRAPKKPAE
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgacaagtcaatcaacaccttctaggagacagactattatttccaagctttttcaattt
tgccgacaaataatcggcccgaataccagtgcaaaaagcgcttcggtaagcagtgaacct
attgttgtcactcgtggtgagcatggtatttcgcgcaaacaatttagcccaaatgcaatc
aaagtactgtaccgtttaaaagatggtggttacgacgcctacctagttggtggttgcatt
cgcgatatattgttgggccaacaaccaaaagattttgatgtagtaaccaatgcaacgcca
gatcaagtaaagaaactttttagaaactgtcgcttaattggtcgtcgctttcgcttagca
catatcgtatttggtcgtgaaattatagaagtcgcaacgatgcgcggacatcacgaagcg
ccagaagataaaaaccaaataagccaatcgagcgatcaaggtcaattactacgtgataac
gtatttggcagtattgaagaagatgcagagcgccgcgacttttcaatcaatgcactttat
tactcaatcaatgattttagtattcatgattacgcaaacggcttagctgcaattaaagcc
aaacaaattgagctcattggtgaccctgaaactcgctaccgtgaagaccctgttcgtatg
ttacgtgcagtgcgttttgccactaaacttgatatgagcatcgcaccgaaaagcgaaaaa
ccaattacagaactagcaagtttgcttgataacattccgccagctcgcttgtttgaagaa
gtacttaaactgtttttaaacggtaaagctgaagctaactttttaatgctgcgtaaatac
ggtttatttaaatcgctatttccagaccttgatagcattttaaataaaaagcctggtggg
ctagagcacacacttgttcagcaaatgtttcaaaacaccgatgaacgtataaatgccgat
aaaaaagtaacacctgcatttatttttgcagcgctactttggtttccattattagcacga
actaaagaaattcaagaacaagagcaactcgttgaatacgatgcttttgctcaagcaatg
aataaagtattgagcgatagcgctcagcacattgcagttccaaaacgctttacactaggt
gctcgcgacatttggcatattcagcaccgtttagataaacgagcagggcaacgcgcttac
agactaacgcaacagcctcgctttaaagccgcttatgactttttgttattacgtgttgat
gcaggtgaaacacagcacaccgaattagcacaatggtggacacagtatctaggccaagac
attaacggccaaaaagagatggttaagaacctaggtcaccctggcggtcctaaaccacga
aagcgcacacgccgtcgtgcacctaaaaagcctgctgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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