KEGG   Syntrophotalea carbinolica: Pcar_1040
Entry
Pcar_1040         CDS       T00285                                 
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
pca  Syntrophotalea carbinolica
Pathway
pca00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pca00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Pcar_1040 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pca01007]
    Pcar_1040 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pca03016]
    Pcar_1040 (aspS)
   03029 Mitochondrial biogenesis [BR:pca03029]
    Pcar_1040 (aspS)
Enzymes [BR:pca01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     Pcar_1040 (aspS)
Amino acid related enzymes [BR:pca01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Pcar_1040 (aspS)
Transfer RNA biogenesis [BR:pca03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Pcar_1040 (aspS)
 Prokaryotic type
   Other AARSs
    Pcar_1040 (aspS)
Mitochondrial biogenesis [BR:pca03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Pcar_1040 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d tRNA-synt_2b
Other DBs
NCBI-ProteinID: ABA88290
UniProt: Q3A5R7
Position
complement(1217542..1219332)
AA seq 596 aa
MIDILGDWKRSHFCGSITAADTGKEVCLMGWVQRRRDHGGLIFIDLRDRQGIAQLALDPD
RDPEAHAKAERVRNEYVVAVRGIVSARPEGTVNPKMATGEVEVEVKELRMLNGAETPPFL
IEDNVDVAENIRLKHRYLDLRRPALQSNLVLRHKVAQIVRNYLNDTGFIEVETPVLTKST
PEGARDYLVPSRVNPGMFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEF
TQIDCELSFVDRQDIMDIMEAMIATVFQQILGIELSLPMPRITYTESMARFGVDNPDMRF
DLELVEISNIAKDCGFKVFADAVKKGGIVKLLNAKQCASFSRKEIDDLTDFVKIYGAKGL
AYVKIQEDGSWQSPIAKFFTEKEIALIDEAAGSEPGDLLLFAADTFKVANESLGRLRGHL
GQKLGLARKDDFRFAWVTDFPLLEWDGEARRHVAVHHPFTAPLDEDIALLDGDPGSARAK
AYDLVLNGSEIGGGSIRIHNREIQNKMFSLMGITAEEAEEKFGFLLGALSYGAPPHGGIA
FGLDRLMMILTGSDSIRDVIAFPKTQKATCLLSEAPGAVDDKQLRELSIRRAVRNN
NT seq 1791 nt   +upstreamnt  +downstreamnt
ttgatcgatattctgggtgattggaaaagaagccatttctgcggcagcattaccgccgcc
gacaccggcaaagaagtgtgtcttatgggctgggtccagcggcgtcgcgaccacggtggc
ctgattttcatcgatctgcgcgatcgccagggtatcgcccagctggccctcgaccctgac
cgcgaccctgaggcgcacgccaaggccgagcgggtccggaacgaatacgtggtcgccgtg
cggggcatcgtttccgcgcgccccgagggcacagtcaatcctaaaatggccaccggcgag
gttgaagtcgaggtcaaggaactgcgcatgctcaacggtgcggagacgccgccgttttta
atcgaggacaatgtcgatgtcgcggaaaacatccgtctcaagcaccgctacctcgacctg
cggcgcccggctttgcaatccaacctggtgctgcgccacaaagtcgctcagatcgtgcgc
aactacctcaacgatacgggcttcatagaagtcgaaacgcctgtcctgaccaaaagcacc
ccggaaggggcgcgtgactatctggtgccgagccgcgtcaaccccggcatgttttacgct
ctgccgcaatcgccgcagctgttcaaacagttgctcatggtgtccggcttcgatcgttac
taccagatcgtcaaatgtttccgggacgaagacctgcgcgccgatcgccagcccgaattc
acccagatcgactgcgaattgagttttgtagaccgccaggacatcatggatatcatggag
gcgatgatcgccaccgtgtttcagcaaatcctcggcatcgagctttcgctgcccatgccg
cgcataacctacaccgagtccatggcccgcttcggtgtcgacaacccggatatgcgattc
gatctggagctggtggaaatttccaacatcgccaaggactgcggtttcaaagtctttgcc
gacgcggtgaaaaaaggcggcatcgtcaaactgctcaacgccaaacaatgcgcgtccttc
tcccgcaaggaaatcgacgatttgaccgatttcgtaaaaatttacggtgccaaagggctg
gcttacgttaaaatacaggaagacggttcctggcagtcgcccatcgctaaatttttcacg
gaaaaggaaatcgccctcatcgacgaagcggccggctccgagcccggcgacttgctgctg
tttgccgccgacaccttcaaggttgccaacgaatccctcggccgcctgcgcggtcatctc
ggacaaaaactgggattggcgcgcaaggacgacttccggtttgcctgggtcaccgacttt
cccctgttggagtgggacggtgaggcccggcgtcacgtggcggtgcatcatcccttcacg
gcacctctcgatgaagacattgcgctcctcgacggcgatcccggcagcgctcgcgccaaa
gcctacgacctggtgttgaacggctccgaaatcggcggtggcagtatccgtatccataac
cgcgagatacagaacaagatgttctccctgatgggcatcacggccgaggaagccgaggaa
aaattcggattcctgctcggcgccctgagctacggagcgccccctcacggtggcattgcc
ttcggactcgaccgtttgatgatgatcctgaccggatccgattccatacgtgacgttatc
gccttccccaaaacccagaaagccacctgcctgttatcggaagcgcctggtgctgtcgac
gacaaacagttgcgggaactctccatccggcgcgcggtccgaaacaattag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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