KEGG   Syntrophotalea carbinolica: Pcar_1259
Entry
Pcar_1259         CDS       T00285                                 
Symbol
msbA
Name
(GenBank) phospholipid/lipopolysaccharide-flipping ABC transporter MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
pca  Syntrophotalea carbinolica
Pathway
pca02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Pcar_1259 (msbA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pca02000]
    Pcar_1259 (msbA)
Enzymes [BR:pca01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     Pcar_1259 (msbA)
Transporters [BR:pca02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Pcar_1259 (msbA)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 AAA_5 AAA_22 Zeta_toxin AAA_16 RsgA_GTPase AAA_29 ABC_ATPase
Other DBs
NCBI-ProteinID: ABA88508
UniProt: Q3A549
Position
1479116..1480855
AA seq 579 aa
MKYNPKQLYQRLWRYSKPYLPRVFLAMFASIVVSGVDVATAKLVKPFVDDVLMAADRGLA
NLVPIIVIGLAVCKGGGRYIQEYFIKTAGQMVVQDIRNDLYRHSMNLSMGYFSRSSTGNV
MSRILNDVGALQRSAADVMVDGLRESFTLMGLTFVAFQSDWRLATIAFLVMPVSIVPASV
IGRRIKENTRRGQRTMGTLTRVLQESLAGIKVIKAFGSEDRECQRFRTENKRFYHFIRKV
LKYDSAATPVIEILSSFGIGAVLWYGIRRVSDGAMTQGDLSAFIAALFMMYAPMKRLTKV
SNTIQRSLGAAERVFELMDEVPEIADQPDAIQAPRAVGNIVFEHVGFSYGDEPVLHDLNL
SIRAGEIAALVGPSGGGKSTVIGLLNRFYDPQQGAIHIDGYDIRQLTQDSLKQSMALVDQ
ETFLFNDTVWNNIRYGRPEASDSEVEEAARQAYADEFVRAMPDGYETVIGDRGVRLSGGQ
RQRICIARAILRDAPILLLDEATSALDTESEATVQKALVNLMNNRTTIVVAHRLSTVMHA
DKIVVLEGGRIREIGRHQDLLSGDGLYRRLYEMQFADRD
NT seq 1740 nt   +upstreamnt  +downstreamnt
ttgaaatacaatcctaaacaactttatcagcgcctttggcgctattccaagccttatctg
ccccgggtgtttctggcgatgttcgcatctatcgtggtttccggcgtggatgtggcaacc
gccaagttggtgaagccctttgtcgatgatgtgctgatggcggccgacagaggtctggcc
aatctggtaccgatcatcgtgattggtctggctgtttgcaagggaggcgggcgttatatc
caggaatattttatcaagactgccggtcagatggtggtgcaggatatccgtaatgatctc
tatcgacattccatgaatctctccatgggatacttttcgcgcagttccacgggcaacgtg
atgtctcgcatccttaacgatgtcggtgccctgcagagatcagccgcggatgtcatggtc
gatggcctgcgggagagttttacccttatggggctgactttcgtggcttttcagagcgat
tggcgtttggccaccattgcatttctggtgatgcctgtatccattgttcccgcaagtgtc
atcggcagacgtatcaaagaaaacacccggcggggccaacgcaccatgggtaccttgacc
cgggttctgcaggagagtcttgccggcatcaaagtcatcaaggcctttggctccgaagat
cgggaatgtcagcggttcagaaccgagaacaaacgtttctatcattttatccgtaaggtt
ctgaagtacgattcggcggccaccccagtgatcgagatcctctcgtccttcggcatcggc
gccgttctttggtacggtatccgccgggtcagcgacggagccatgacgcagggggatttg
tcggcgtttatcgccgcattgttcatgatgtatgcccccatgaagcgtttgaccaaggta
agcaataccatccagcggtcactcggtgccgcggagcgggtctttgaactcatggatgaa
gttcccgaaattgccgatcagcccgatgccatacaggcgccaagagctgtcgggaatatc
gtttttgagcatgtgggtttctcgtatggtgatgagccggtgctgcatgatcttaatctg
tcgattcgggccggggaaattgcggccctggtcggtccgagcggcggcggtaaatcgacc
gttatcggccttctgaaccgtttttacgacccgcaacagggtgccattcatatcgatggg
tacgatatccgtcaattgacccaggatagcctcaaacagagcatggccctggtcgatcag
gaaacctttttgtttaacgatacggtgtggaataatatccgttacggtcgtcccgaagcc
agcgattccgaagtcgaagaggctgccaggcaggcttatgcggacgagttcgtgcgtgcc
atgcccgatgggtatgaaacggttatcggcgaccggggcgtccgcctgtccggcggccag
cgccagcgcatctgcattgcacgcgccattttgcgcgatgcgccgattctactgcttgac
gaggcgaccagtgccctcgacaccgaaagcgaagcaacggtgcaaaaagctctcgtcaat
cttatgaacaaccgtaccaccatcgttgtcgcgcatcggctatccaccgtcatgcatgcc
gacaagatcgtggttctggagggtggccgtattcgcgaaatcggtcgccatcaggatttg
ctctccggtgacggtctttaccggcgtctgtatgagatgcaattcgccgaccgggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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