KEGG   Syntrophotalea carbinolica: Pcar_2716
Entry
Pcar_2716         CDS       T00285                                 
Name
(GenBank) deoxyribodipyrimidine photolyase, putative
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
pca  Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:pca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pca03400]
    Pcar_2716
Enzymes [BR:pca01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Pcar_2716
DNA repair and recombination proteins [BR:pca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Pcar_2716
 Prokaryotic type
    Pcar_2716
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: ABA89952
UniProt: Q3A105
Position
3172345..3173817
AA seq 490 aa
MPSSDDIRIEVLIRRPPRADGRYILYWMNATRRLSWNFALQRALSWARKLDRPLLVVETL
PCDHPHANLRHHAFALDGMADNARYMADHPATYYPFVEDQPGQNIELIAALAKHACVVLC
DLRPLRESLGETEQLAGRLSGRLERVDSNGILPLLAADREFTTAYSLRRFLQRHLLPHLL
NMPLPEPLAEHTLPPCPAVPSAIRKRWPAADRQLLTEDRSRLHNLPIGQNTPAVPTKGGS
EAARKALDLFLREHLDLYVAHRNQPQRDVTSGLSPYLRWGHISSHEIVQRLLDREGWHPS
DLGLETRGQRSGWWGVGADAEAFLDQLVTWRELGHLFCFKRHDYDRMESLPAWAQTTLQD
HMQDPRPYLYSLEEFQAGRTHDPLWNAAQMQLVREGRLHNYLRMLWGKKILQWSPTPELA
LATMIELNDRFALDGCDPNSYSGIGWVLGRFDRAWGPQRPVFGKIRYMSSRNTARKVAVD
KYIARYTPCS
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgccgagttctgacgatatacgcatcgaagtccttatacgtcgtccaccccgggcagac
ggtcgctatatcctctactggatgaacgccacgcgccgtttaagctggaattttgcctta
cagcgggccttgtcatgggccaggaaactggatcgccctttgctggtggtggaaaccttg
ccctgcgaccatccccacgccaatctgcgccatcacgcttttgcccttgacggcatggcc
gataacgcccgttacatggccgaccatccagcgacttactatccgtttgtcgaggatcag
cccggtcaaaacatcgaactcatcgccgctctcgccaagcatgcctgcgtggtcctctgc
gatctgcgccccttgcgcgaatcgctcggcgaaacggaacaactggcgggcaggctaagt
gggcgactggagcgtgtcgacagcaacggcatactgcccttactggctgccgaccgcgaa
ttcaccaccgcctatagcctgcggcgctttttacaacggcatctgctgccgcacctgctg
aacatgccgctgccggaacccctggccgaacataccctgcctccgtgccctgccgtgccg
agtgccattcgaaaacgctggccggccgccgaccgccaactccttacggaagaccgcagc
cgcctgcataacctgcccatcggccagaataccccagcggtgccaaccaaaggcggtagt
gaagcagcccgaaaggcactggacctgtttttgcgtgaacacctcgacctttacgttgct
caccgcaaccaaccccaacgggacgtaaccagcggcctgtccccttatttgcgctggggg
cacatatcaagtcatgaaatcgttcagcggttgcttgaccgggagggctggcatccatcc
gacctggggctggaaacacggggccagcgcagcggctggtggggcgtgggcgcggatgcg
gaagcgtttctcgaccaactggttacctggcgtgaactcggccacctgttctgtttcaag
cggcatgactatgaccgaatggaaagcctgcctgcctgggcgcaaaccaccctgcaggac
catatgcaggatccccgtccctacctgtacagtcttgaggagtttcaggccggccggacc
cacgatccgctgtggaacgccgcgcagatgcaactggtgagggaaggtcgcctgcataac
tacctgcgcatgctgtggggcaagaagatcctgcagtggagccccacccctgagctggca
ttagccaccatgatcgaactcaacgaccgtttcgccctggatggttgtgaccccaactcg
tacagcggcataggctgggtgttgggacgctttgaccgggcatggggtccgcagcgcccc
gttttcggcaagattcgttacatgagttcgcgcaacaccgcacgcaaggtggccgtggat
aaatacatcgcacgttatacgccatgcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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