KEGG   Syntrophotalea carbinolica: Pcar_2729
Entry
Pcar_2729         CDS       T00285                                 
Name
(GenBank) type III restriction-modification system, restriction subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
pca  Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:pca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pca02048]
    Pcar_2729
Enzymes [BR:pca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     Pcar_2729
Prokaryotic defense system [BR:pca02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   Pcar_2729
SSDB
Motif
Pfam: ResIII DEAD Helicase_C
Other DBs
NCBI-ProteinID: ABA89965
UniProt: Q3A0Z2
Position
complement(3186393..3189122)
AA seq 909 aa
MKLKFKVQPYQTNAVEAVVDCFAGQVNTSRIKYRVDPGMVKDKAGRGQDSLLEVEGFKNA
DIQLSGLQLLDNIRAVQRRQNLFMSNSLVKSAGCDINLDVEMETGTGKTYCYIKTIFEMN
KRYGWSKFIVVVPSVAIREGVYKSLEITADHFTENYGKKARFFIYNSKQLHHLESFSSDA
GINVMVINIQAFASRGADNRRIYDELDDFQSRKPIDVIAANRPILILDEPQKMEGRATLE
SLAKFNPLMILRYSATHRTTHNKVHRLDALDAYNQKLVKKIAVRGITVKGLAGTNAYLYL
ESIEISKQAPVARIELEVKLKSGGIRRRIVRLEKGADLFAQSNELDQYRGFVISQIDATK
DTVEFTNGHELRAGDATGDVTEGTIRRIQIRETIKAHLEKERKLFSQGIKVLSLFFIDEV
AKYRDYDQTDDKGEYARIFEEEYQLLKQETLGELVFDNEEYRKYLDNILPERTHNGYFAI
DKKTKQFKDPKFKTRGQNAGLSDDVDAYDLILKDKERLLGFEEPTRFIFSHSALREGWDN
PNVFVMCMLKHSDNTISRRQEVGRGLRLCVNEQGDRMDHPAIVHDINVLSVVASESYKDF
VANLQQEISDSLSARPRKADEAYFTGKILTTESGQMEVTPAMAKQLYRYLLKNDYTDDAD
QVTEEYHAAKGNGELAKLPDELAPYADQIFLLVDSVFSDALLPKPEDDRGPKTNPLNDNF
KKKEFQELWSRINRKAVYRVDFDSDELVRKCVAALNQDLRITPLQYRIQAGIQSANLTDE
QLKKGQGFVVSDTSTEAHNASVLSMVKYDLLGKLAENTQLKRKTVAEILSGIEAVAFGQF
KTNPEHFISEASRLIKEQKASVIIKRLSYDETTEVHDADIFTAAQTKQDFTRASEKLKNH
IYDYVLGPG
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaaactcaagttcaaagtccagccctatcagaccaacgccgttgaggcggtggtggat
tgctttgccgggcaggtgaatacatcgcgaatcaagtaccgtgtcgatcccggcatggtc
aaagacaaggccggcagggggcaggacagtctgcttgaggttgagggtttcaagaacgct
gatatccagctatccggtcttcagttgctggacaatatccgtgccgtccagcggcgacag
aatctgtttatgtccaattcgctggtgaaaagcgcggggtgcgatatcaaccttgatgtc
gagatggagaccggcaccggtaagacctactgctacatcaaaaccattttcgagatgaac
aagcggtacggctggtccaagttcatcgtggtcgtcccgagcgtcgccatccgggaaggg
gtctacaagtcgctggagataaccgccgatcactttaccgagaactacggaaagaaagcc
cggttctttatctacaactccaaacagctccatcacctggaaagcttttcctctgacgcc
ggcatcaacgtcatggttatcaacatccaggcgtttgcatcacgcggcgccgacaatcgc
cgcatttatgatgaactggacgatttccaatcccgcaagcctatagatgttatcgccgct
aaccggccgattctgatcctggatgagccacagaaaatggaggggagagctacgctggaa
tctctggcaaaattcaaccctttgatgattttgcgctattccgcgacccatcgcaccacc
cacaacaaggtccatcgcctcgatgctctggatgcctacaaccagaagctggtgaaaaag
attgccgtgcggggcattacagtcaagggcttggccggaaccaatgcctatctttatctg
gagtcgatcgaaatctcgaaacaagccccagtggctcgtattgaactggaggttaaactc
aaatcgggtggaatccgaaggcggatcgtccggctggaaaaaggggcggatcttttcgcc
cagagcaatgagcttgaccaataccgcggattcgttatctcccaaatcgacgctaccaag
gataccgttgagttcactaacggccatgagttgcgggctggagatgcaacgggggacgtg
acggaaggaaccattcgacgtatacagatccgcgaaaccatcaaagcgcacctggaaaag
gagcggaagcttttctcccaggggatcaaggtcctgtcgctgtttttcatcgacgaagtt
gccaaatatcgagattacgatcagacggatgacaaaggggagtatgcgcgcatcttcgag
gaggagtatcaactgctcaaacaggagacccttggggagttggtattcgacaacgaagaa
taccgcaaatatctcgataacatcctgcctgaacggactcataacgggtacttcgccatc
gacaagaaaaccaagcagttcaaggaccctaaatttaaaacgcgtggccagaatgcggga
ttgtcggatgatgtcgatgcctatgatttgattctcaaagacaaggaacgcttgctgggg
tttgaagagccgactcgatttattttttcccactccgcattaagggagggctgggataat
ccaaacgtttttgtcatgtgcatgctcaagcacagcgacaataccatctcgcgccgtcag
gaggttggccgagggctacggctgtgcgtcaatgagcagggcgaccgcatggatcatcct
gccattgtccatgacatcaacgtcctttcggtggttgccagcgagagttacaaagacttt
gtggccaatttgcagcaggaaatcagtgattcgttgtctgcacgcccgagaaaggcggac
gaagcatactttacgggcaaaatcctgacgaccgaatccggccagatggaagtcacgccg
gcaatggccaagcagctctatcgctacctgctcaagaatgattacaccgacgatgcggac
caggttacggaggaataccatgcggccaaaggcaacggcgagctggcaaaactccccgat
gagttggctccttatgccgatcaaattttcctcttagtcgatagcgtcttcagtgatgcg
ctgctgcccaaaccagaagacgacagaggcccaaaaaccaatcctctgaatgacaatttc
aagaaaaaggagttccaggaactctggagtcgaatcaatcgcaaggcggtataccgggtc
gattttgactcggatgagttggttcggaaatgtgtcgcggccttgaaccaggatctgagg
atcacgcccctgcagtacaggattcaggctggaatccagagtgccaacctgaccgacgag
cagctcaaaaaagggcagggcttcgttgttagcgatacatcgaccgaagcgcataatgca
tcggttctctccatggtgaagtacgaccttcttggaaagcttgccgaaaacactcaactg
aaacgcaagacggtcgcggaaattctcagcggcattgaggctgtcgcattcggccaattt
aaaaccaacccggaacacttcatctcggaagcgtctcggttgatcaaagagcagaaggca
tccgtcattattaagcggctcagttacgacgaaactaccgaggtgcatgacgccgacatt
tttaccgctgcacaaaccaagcaggatttcacccgagcgagcgagaagctcaaaaaccac
atttacgattacgtgttgggtcccggatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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