KEGG   Syntrophotalea carbinolica: Pcar_2864
Entry
Pcar_2864         CDS       T00285                                 
Name
(GenBank) ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
pca  Syntrophotalea carbinolica
Pathway
pca03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pcar_2864
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pca03032]
    Pcar_2864
Enzymes [BR:pca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     Pcar_2864
DNA replication proteins [BR:pca03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    Pcar_2864
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     Pcar_2864
   Elongation factors (archaeal)
     Pcar_2864
SSDB
Motif
Pfam: 5_3_exonuc_N RNase_H 5_3_exonuc HHH_2 HHH
Other DBs
NCBI-ProteinID: ABA90099
UniProt: Q3A0K8
Position
3349400..3350842
AA seq 480 aa
MNPSPQLYLLDGSSYIYRAFYGIRDVATADGMPTNAVFGFTRMLLNLLQEHSPDYLAVVF
DRPREETFRREIYSEYKAHRDAMPDELAPQIPYIRQILQALNIPALEAPGFEADDVIATL
GRRHAADGLQVTVVTGDKDLMQIVGDRIELLDTMKDTRSGAQQVFERFGVPPELVADVLG
LAGDTSDNIPGVPGVGEKTASELVQRFGSLEGVLKWTSLVNGKKRRSNLETYAEQARLSK
TLATLRDDVPLEISLADLQRRKPNLAELIPLLRELEFEALEIAFTPPPPNVVEIYSDGSG
RDSGPGGYGVILRYGEHEKELSGFEPAATSQRMELLAAIRGLEALNKPQKVRVFSDSQYL
VRGMSQWMHGWIRDDRLETPGALANQDLWQQLLALSKQHEVSWEWVRGHAGHPFNERCDK
LAKQAVEEGLQKTAEVSQPEAMATEELPRPVQPKPAKRAAAPTREDTEFDVEEDGQLRLC
NT seq 1443 nt   +upstreamnt  +downstreamnt
gtgaatccatcgccgcaactgtacttactcgacggctccagttacatctaccgggccttc
tacggcatccgcgatgtcgccaccgctgacggcatgcccaccaatgccgtcttcggtttc
accaggatgctgctgaacctgctgcaggagcacagtcccgattatctggccgtggtattc
gatcgccccagggaggagaccttccgccgggaaatttattcggaatacaaggcccatcgg
gatgccatgcccgacgaactggcaccgcagatcccttacatccggcagatcctgcaagcc
ctcaacatccccgctctggaagcccccggatttgaggccgatgatgtcattgccaccctg
ggccgccgccatgccgccgatggcctccaggtcacggtggtcaccggcgacaaggatctg
atgcagatcgtcggcgaccgtatcgaactgctcgacaccatgaaggatacgcgctccggt
gcgcaacaggtgtttgagcgcttcggcgtccccccggaactggtagccgatgtcctggga
ctggccggcgacacctcggacaatatccccggtgtgcccggggtcggtgagaagaccgcc
tccgagctggtacaacggttcggctctctggaaggcgtcctcaaatggaccagtctggtc
aacggcaagaaacgccgcagcaatttggaaacctatgccgagcaagcccgactctccaaa
accctggccaccctgcgggacgatgtccccctggagatatctctggccgacctgcaacgg
cgcaaaccgaaccttgcggagctgattcccctgttgcgtgaactggaattcgaggctctg
gagatcgccttcaccccgccgccgccgaacgtggttgaaatctacagcgatggttcgggg
cgggactctggccccggaggctatggtgtgattctgcgttatggggaacacgaaaaggag
ttgagcggatttgaacctgccgccacctcgcaacgcatggaactgctggcggcgatccgt
ggactggaggccctgaataaaccgcagaaggtgcgggtattcagcgattcccagtacctg
gtgcgaggcatgagccagtggatgcacggatggattcgtgatgaccgcctcgagactccg
ggcgcccttgccaaccaggatctctggcagcagctgctggctctgtccaagcagcatgag
gtcagctgggaatgggtgcggggccacgccggccatcccttcaatgaacggtgcgacaag
ctggcaaaacaggcggtggaagagggcctgcaaaagacggcagaggtttcgcaacccgag
gcgatggcaacagaagagctgccccgaccagtacagccgaaacccgccaaacgggctgcg
gctccgaccagagaggatacagaattcgatgtcgaggaagacggtcagctgcggctgtgt
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system