KEGG   Syntrophotalea carbinolica: Pcar_3101
Entry
Pcar_3101         CDS       T00285                                 
Symbol
pcnB
Name
(GenBank) nucleic acid-independent polyadenylating polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
pca  Syntrophotalea carbinolica
Pathway
pca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pcar_3101 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pca03019]
    Pcar_3101 (pcnB)
Enzymes [BR:pca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Pcar_3101 (pcnB)
Messenger RNA biogenesis [BR:pca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Pcar_3101 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd PolyA_pol_arg_C
Other DBs
NCBI-ProteinID: ABA90336
UniProt: Q39ZX1
Position
3617378..3618655
AA seq 425 aa
MDTGAQGPVIVPRSQHSISRKHINEHSLKVLYRLRNHGFKAYLVGGGVRDLLLNRRPKDF
DVATDATPSQVKKLFRNCFLVGRRFRLAHIRFAENYVVEVATFRRQPRPEELPDDPAEHF
FFTENVFGTPREDAFRRDFSINGLFYNIDDFSVIDHVGGLQDLEARRLRVIGDPLVRFTE
DPVRMLRALEFAARLGFSLDEGIREAIYLRGPLIAEAAPARIREEVMELFRHAVAGPVFR
EAQAMGLLSHLLAGYEVTEETLALLEGVDRRTGKGAAVEESLVLATLFLARFRHALPTDD
EATIGNALQLANLLLTPMCAYFRIAHGTRARARDLLIGFFRLSRGRGRRGEARFLRHTSS
VQALEFFALWCETTQQQLDLLADWRLAFAGTEAPSAKSSKPSRRRPRRRRRSGQRRSPKP
APKAD
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggataccggcgcacagggccctgtaatcgtgccccgttcacaacattccatttcccgc
aaacacatcaacgaacatagtctcaaagtcctgtaccggctgcgcaatcacggtttcaag
gcttatctggtcggcggaggcgtacgtgacctgcttctgaatcggcgccccaaggatttc
gatgtagcgaccgatgccaccccgtcgcaggtcaaaaaactgttccgcaactgcttcctg
gtcggccggcggtttcgcctggcccatatccggtttgccgaaaactacgtcgtcgaagtc
gccaccttccggcggcaaccgcgccccgaggaactgccggacgatccggcggaacatttc
ttctttaccgaaaacgtgttcggcacgccgcgcgaagatgcctttcgccgcgacttttcc
atcaacggactgttttacaacatcgacgatttttccgtcatcgaccacgtcggcgggctc
caggatctggaagccagacgcttgcgggtcatcggcgatccgttggtgcgattcaccgag
gatccggtccgcatgttgcgggctctggagtttgccgcgcgcctgggcttttccctcgac
gaagggattcgggaagccatctatctgcgcggccccctgattgcggaagcagcgccggcc
cggattcgcgaggaagtgatggaactgtttcggcacgcggtggcggggccggtgttccgc
gaagcccaggccatggggctgctgagccacctgctggccggttacgaggtaaccgaggaa
accctggcgctgctggaaggcgtcgaccggcgcaccggcaaaggtgccgccgtggaagaa
tcgctggtactggcgaccctgtttctggcacgctttcgccatgccctgccgacagacgat
gaagccacgataggcaacgccttgcagctggccaatctgctgctcacccccatgtgcgcc
tatttccgcatcgcccacggaacccgtgcccgtgcccgggacctgctcatcggtttcttc
cgtctcagccgaggccgcggtcggcggggcgaggcccgcttcctgcgtcacaccagctcc
gtgcaagcactggagttctttgccctctggtgcgaaaccacgcagcagcaactcgatctg
ctggcggactggcggctggcttttgccggcaccgaggccccgtccgccaaaagtagcaaa
cccagccgtcgccgtcctcgccgccggcggcgaagcgggcaacgacggtcgcctaagccg
gctcccaaggcggactag

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