KEGG   Physeter catodon (sperm whale): 102973179
Entry
102973179         CDS       T06011                                 
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
  KO
K08525  retinoid X receptor beta
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad03320  PPAR signaling pathway
pcad04659  Th17 cell differentiation
pcad04919  Thyroid hormone signaling pathway
pcad04920  Adipocytokine signaling pathway
pcad04928  Parathyroid hormone synthesis, secretion and action
pcad05200  Pathways in cancer
pcad05202  Transcriptional misregulation in cancer
pcad05207  Chemical carcinogenesis - receptor activation
pcad05216  Thyroid cancer
pcad05222  Small cell lung cancer
pcad05223  Non-small cell lung cancer
pcad05226  Gastric cancer
pcad05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    102973179 (RXRB)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102973179 (RXRB)
   03320 PPAR signaling pathway
    102973179 (RXRB)
   04919 Thyroid hormone signaling pathway
    102973179 (RXRB)
   04928 Parathyroid hormone synthesis, secretion and action
    102973179 (RXRB)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102973179 (RXRB)
   05202 Transcriptional misregulation in cancer
    102973179 (RXRB)
   05207 Chemical carcinogenesis - receptor activation
    102973179 (RXRB)
  09162 Cancer: specific types
   05226 Gastric cancer
    102973179 (RXRB)
   05216 Thyroid cancer
    102973179 (RXRB)
   05222 Small cell lung cancer
    102973179 (RXRB)
   05223 Non-small cell lung cancer
    102973179 (RXRB)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    102973179 (RXRB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcad03000]
    102973179 (RXRB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pcad03310]
    102973179 (RXRB)
Transcription factors [BR:pcad03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    102973179 (RXRB)
Nuclear receptors [BR:pcad03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   102973179 (RXRB)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 102973179
NCBI-ProteinID: XP_007107945
Ensembl: ENSPCTG00005011572
UniProt: A0A2Y9ETG3
Position
18:complement(68531365..68538133)
AA seq 540 aa
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAVAAGEQQ
TPEPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAAPPSPPGPPLPPSAAASLGGSG
APPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPE
DVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDL
TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPE
EMPVDRILEAELAVEQKSDQGVEGPGGTAGSGSSPNDPVTNICQAADKQLFTLVEWAKRI
PHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIF
DRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLET
YCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcagcagcagcggcggcggcggtggcagccggagaacaacaa
accccggagccggagccggagccgggggaggctggacgggacgggatgggcgacagcggg
cgggactcccgaagcccagacagttcctctccaaatccccttccccagggggccgctccc
ccttctcctccggggccacccttacccccttcagcagctgcatcccttggaggctctggg
gctccacccccacccccgatgccacccccgccactgggctcccccttcccggtcatcagc
tcttccatggggtcccctggtctgccccctccagctcccccaggattctccgggcctgtc
agcagtccccagattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaa
gatgtgaagccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggc
cctggggctggcaaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactac
ggggtttacagctgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctg
acctactcgtgccgggacaacaaggactgcacggtggacaagcgccagcggaaccgctgt
cagtactgccgctatcagaagtgcctggccactggcatgaagagggaggcggtacaggag
gagcgtcagcgggggaaggacaaggatggggatggggagggggctgggggagcccccgag
gagatgcctgtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccag
ggcgttgagggtcctgggggaaccgcgggtagcggcagcagcccaaatgaccctgtgact
aacatctgccaggcagctgacaaacagctcttcacacttgttgagtgggcaaagaggatc
ccacacttttcctccttgcctctggatgaccaggtcatactgctacgggcaggctggaac
gagctcctcattgcctccttctctcaccgatccatcgatgtccgagacggcatcctcctc
gccacaggtctgcacgtgcaccgcaactcagcccattccgcaggcgtgggagccatcttt
gatcggtccctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatg
gacaagacagaacttggctgcctgagggcaatcattctgttcaatccagatgccaagggc
ctctccaaccccagcgaggtagaggtcctgcgggagaaagtgtacgcgtccctggagacc
tattgcaaacagaagtaccctgagcagcagggccggtttgccaagctgctcttgcgtctt
cctgctctcaggtccataggccttaagtgtctagagcatctgtttttcttcaagctcata
ggcgacacccccatcgacaccttcctcatggagatgcttgaggctccccaccagctggcc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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