KEGG   Physeter catodon (sperm whale): 102979284
Entry
102979284         CDS       T06011                                 
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    102979284 (XPC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcad03400]
    102979284 (XPC)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      102979284 (XPC)
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 102979284
NCBI-ProteinID: XP_028335567
Ensembl: ENSPCTG00005021979
UniProt: A0A455AGZ6
Position
18:7507138..7530545
AA seq 749 aa
MMKRFNKEVREDTHKVHLLCLLANGFYRNSICNQPDLRAIGLSIVPTRFTKVPPQDVDIS
YLSHLAKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDNEELVHIFLLILRALHLP
TRLVLSLKPIPLKLSAAKGKKPSKERSTEGPGGSSETSSQVPGKPSKPETSRGSRREDTS
SEGTGSARAKGKGSKAAAVRKKRSEPSSSREEEGKAGGQTEGTQRRSRGRERRAAARVSY
REESGSDKASSGSDFELSSSDSHRPSDEDSEPGLPRQRRATAPQSMKVGCKRESRSQRGS
HRQPPGFPEASVSASGSKRKRGKHRMPVDGEEADGRRAAGVDQWLEVFSEREEKWVCVDC
VHGVVGQPLTCYQYATKPVTYIVGIDGDGWLRDVTQRYDPAWMTATRKCRVDAAWWAEAL
RPYRSPLVEREQREDQEFQARHLDQPLPTVIGTYKNHPLYALKRHLLKYEAIYPETAAIL
GYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKVVKGYSNRARRARLAEPQLQDY
NDLGLFGKWQTEEYQPPVAVDGKVPRNEFGNVYLFLPGMMPVGCVQLNLPNLHRVARKLN
IDCAQAVTGFDFHKGYSHPVTDGYIVCEEYKDVLLTAWENEQALIEKKEKEKREKRALGN
WKLLVKGLLIRERLRLRYGAQSEEAAPHADAGGGLSSDEEEGTSSPAEVARILAASWPQN
REVEEKRKCPRKSRREKEAASHLFPFEKL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgatgaaacgtttcaataaggaagtccgtgaggacacgcacaaggttcaccttctgtgt
ctgctggcaaatggcttctatcgaaatagcatctgcaaccagccagatctgcgtgccatc
ggcctctccatcgtcccaactcgctttaccaaagtgccccctcaagacgtggacatcagc
tacctgtcacacctggcaaaatggttcattggaacatttacagttaatgcggacctttca
accaatgagcaggatggcctgcagacgacgctggagagaaggtttgctatttactctgcg
agagacaatgaagagttggtccacatatttttactgattctccgggccctgcatctccct
acccgactcgtactgtctctaaagccgattcctctgaagttatcagcagcgaagggaaag
aaaccttccaaggagagatccacagagggtcctggaggctcctcagaaacttccagccaa
gttcctggaaagccaagcaaaccagagaccagcagaggaagcagacgagaggacacgtct
tctgagggcactggcagtgcacgtgccaaagggaaggggagcaaggcggctgccgtcagg
aagaagcggagcgagccctcctccagcagggaagaagagggcaaggccggggggcagacg
gaggggacccagaggcgttcgcggggccgggagcggcgagcggccgccagggtgtcttac
agagaggagagtgggagtgacaaggccagcagcggctctgactttgagctctccagctcg
gacagccatcgcccatccgacgaggattctgagccaggccttccaaggcagaggagggcc
actgcccctcagagtatgaaggtggggtgcaagagggagtccaggtcccagcgtggaagc
caccgtcagccccctggctttccagaagcatctgtaagcgcgtccggcagtaagcgtaag
agaggcaagcacaggatgcccgtggatggtgaggaggcagacggccggagagcagctggt
gtggaccagtggctggaggtgttctctgagcgggaggagaagtgggtgtgcgtggactgt
gtgcacggggtagtgggccagcccctgacctgctaccagtacgccaccaagcctgtgacc
tacatcgtgggcatcgacggcgacggctggttgcgcgacgtcacacagaggtacgaccct
gcctggatgacggcgacccgaaagtgccgggttgatgctgcgtggtgggccgaggccctg
cgaccctaccggagcccgctggtggagagggagcagagggaggaccaggagtttcaggcg
aggcacctggaccaacctctgcccaccgtcataggcacgtacaagaaccaccctctgtac
gccctcaagaggcacctcctcaagtacgaggccatctaccctgagacggccgccatcctc
gggtactgccgcggagaggctgtctactccagggactgcgtgcacaccctgcactcgagg
gacacgtggctgaaacaggcccgagtggtgaggcttggagaagtgccctacaaggttgta
aaaggctattccaaccgggcccggagagcccgcctggctgagccgcagctgcaggactac
aatgacctgggcctgtttggcaagtggcagaccgaggagtaccagccgccggtggccgtg
gacgggaaggtcccccggaacgaatttgggaacgtgtacctcttcctgcccggcatgatg
cctgtcggctgcgtccagctgaacctgcccaacttgcaccgcgtggcccgaaagctgaac
attgactgtgcccaggctgttacgggcttcgatttccacaaaggctactcccatcccgta
accgatggctacatagtctgtgaggagtataaagatgtgctcctgaccgcctgggagaac
gagcaggcgctcattgagaagaaggagaaggagaaaagggagaagcgggctctggggaac
tggaagctgctggtcaaagggctgctcatccgggagcggctgaggcttcgctacggggct
cagagcgaggaagccgctccccacgcagacgcaggaggaggactctcttcagacgaggag
gaggggaccagctctccagcagaagtggccaggatcctggcggcctcctggccccagaac
cgagaggtagaggagaagcggaagtgcccccggaagagcaggagggagaaggaggcagct
tctcacctgttcccgtttgagaagctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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