KEGG   Physeter catodon (sperm whale): 102980648
Entry
102980648         CDS       T06011                                 
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad04371  Apelin signaling pathway
pcad04613  Neutrophil extracellular trap formation
pcad05034  Alcoholism
pcad05203  Viral carcinogenesis
pcad05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    102980648 (HDAC4)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102980648 (HDAC4)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    102980648 (HDAC4)
   05203 Viral carcinogenesis
    102980648 (HDAC4)
  09165 Substance dependence
   05034 Alcoholism
    102980648 (HDAC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102980648 (HDAC4)
Enzymes [BR:pcad01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102980648 (HDAC4)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102980648 (HDAC4)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 102980648
NCBI-ProteinID: XP_028339101
Ensembl: ENSPCTG00005011238
UniProt: A0A455B500
Position
2:complement(136918732..137178006)
AA seq 1103 aa
MSSQSHPDGLSGRDQPVELLSPARVNHMPGSADVASALPLPAAPPAVPTDLRLDHQFPLP
TTEPGVRERQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIRQQQELLA
VKHQQELLEHQRKLERHRQEQELEKQHREQKLQRLRNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASVSYSHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGNASAENGIAPAVPSIPTETSLAHRLVTREGSVGPLPLYTSPSLPNITLGLPA
TGPSAGAASQQEAERLALPALQQRISLFPGTHLTPYLGSAPLERDSGAAPSSLLQHVVLL
EQPPAQTPLVADRYLAGLGALPLHAQPLVGAERVSPSVHKLRQHRPLGRTQSAPLPQSAQ
ALQHLVVQQQHQQFLEKHKLHLSKQALLLEQQRVHQLRSYQASMEAAGIPVSLGGHRPLS
RAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLMLKHQCACGNTNSHPEHAGRIQSIWSR
LQETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTNPLNRQKLDSKKLLGSLTSVFVR
LPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEEST
PMGFCYFNSVAVAAKLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDG
NFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVL
VSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEAC
VSALLGNELDPLPEKVLQQRPNANAVRSMEKVIEIQSKWPGPVLSWETLLGERPKGGGRT
PWPRLPPLGFCLSRCQLLPQADMTGTCVQLECNELAETLVLPPFISPHPATLVSSAPLYG
VKELRLKESVRSLALGPQLAGGDLRVSLCPRVWPLPLDQRIPPHSSEDPQPAETQRRVQP
PSRPAWGPPALPSSHSCLSWSSG
NT seq 3312 nt   +upstreamnt  +downstreamnt
atgagctcccaaagccatccagatggactttccggccgagaccagccagtggagctgctc
agccctgcccgcgtgaaccacatgcccggctcggcggatgtggcctcggcgctgcctttg
ccagcggcacccccggcggtgcccacggacctgcgcctggaccaccagtttccgctgccc
acgacggagcccggcgtccgggaacggcagctgcagcaggagctcctggccctcaagcag
aagcagcagctccagaggcagatcctcatcgccgagttccagaggcagcacgagcagctg
tcccggcagcacgaagcccagctgcacgagcacatcagacaacagcaggagctgctggcc
gtgaagcaccagcaggagctgctggaacatcagcggaagctggagaggcaccgccaggag
caggagctggagaagcagcaccgagagcagaagctgcagcggctcaggaacaaggagaaa
ggcaaagagagtgctgtggccagcacagaagtgaagatgaagctacaggagtttgtcctc
aataaaaagaaggcgctggcccaccggaacctgaaccactgcatgtccagtgaccctcgc
tactggtatgggaagacgcagcacagctccctggaccagagctccccgccccagagcggg
gcgtcggtctcctacagccacccggtcctgggcatgtacgacgccaaagatgactttcct
ctcagaaagacagcttctgaacccaatctgaaattacgctccaggctaaagcagaaagtg
gctgaaagacggagcagccccctgttgcgcaggaaagacgggccagtggtcacggctctc
aaaaagcgtcctttggacgtcacagactcggcctgcagcagcgccccgggctctgcaccc
agctcacccaacaacagctctgggaacgccagcgcggagaatgggatcgcgcccgctgtc
cccagcatcccgaccgagaccagcctggcgcacagactggtgacgcgagaaggctcggtg
ggcccgctgcccctgtacacgtcaccatccctgcccaacatcacgctgggacttcccgcc
accggcccctccgcgggggcggccagccagcaggaggccgagagactggccctcccagcc
ctccagcaacgcatctccctcttcccgggcacccacctcaccccctacctgggcagcgca
cccctggagcgcgactcgggggcggctcccagctcccttctgcagcacgtggtcctcctg
gagcagccgcccgcgcagacgcccctcgtcgcagaccgctaccttgcaggcctgggagcg
ctgcccctgcacgcgcagcccctggtgggggcggagcgcgtgtccccgtcggtgcacaag
ctgcggcagcaccgcccgctgggccgcacgcagtcggcgccgctgccccagagcgcgcag
gcgctgcagcacctggtggtccagcagcagcaccagcagttcctggagaagcacaagctg
cacctcagcaagcaagccctcctcctggagcagcaacgggtccaccagctgaggagctac
caggcgtcgatggaggcggccggcatccccgtgtccctcggcggccaccggcctctgtcc
cgggcgcagtcctcccccgcgtccgccaccttccccatgtctgtgcaggagcccccgacc
aagccgcggttcaccacaggcctcgtgtacgacacgctgatgctgaagcaccagtgcgcc
tgcgggaacaccaacagccaccccgagcacgccgggcgcatccagagcatctggtcccgg
ctgcaggagaccggccttcgaggcaaatgcgagtgtatacgcggacgcaaggccaccctg
gaggagctgcagacagtgcactcagaggcgcacgccctgctctacggcacaaaccccctc
aacaggcagaaactggacagtaagaaacttctaggctcgctgacgtcggtgtttgtcagg
ctgccctgcggtggtgtcggggtggacagtgacaccatatggaacgaggtccactcgtcg
ggggcggcccgcctggccgtgggctgtgtggtggagctggtcttcaaggtggccacgggg
gaactgaagaatggctttgccgtggtccgccccccaggacaccacgcggaggagagcacg
cccatggggttctgctacttcaattccgtggccgtcgcagccaagctgctccagcagagg
ctaagtgtcagcaagaccctcgtggtggactgggacgtgcaccacgggaacgggacccag
caggccttctacagtgaccccagcgtcctgtacatctcgctgcaccgctacgacgacggg
aacttcttcccgggcagcggggcgcctgacgaggtgggcacggggcccggcgtgggcttc
aacgtcaacatggctttcaccggcggccttgacccccccatgggagacgcagagtacttg
gcggccttcaggactgtggtcatgccgatcgccaacgagtttgccccagacgtggtgctg
gtgtcatcgggcttcgacgccgtggagggccaccccacgcccctcggaggctacaacctc
tccgccaaatgtttcgggtacctgacgaagcagctgatgggcttggctggcggccggatc
gttctggcgctggaggggggccacgacctcacagccatttgcgacgcctcggaagcctgc
gtctctgctttgctgggaaacgagcttgatcctctcccagaaaaggttttacagcagaga
cccaatgcgaacgccgtccggtcgatggagaaggtcattgaaatccagagtaagtggcct
ggtccggtgctcagctgggagaccctcctgggggagagacccaagggaggagggaggacc
ccgtggccccgtctcccacccctgggcttctgtctctctcgctgccagctgcttccccag
gccgacatgacagggacttgcgttcagctagaatgcaacgagctggcagagactctcgtt
ttacccccgttcatttccccacaccctgctacactcgtgtcatcggctccgctttatggg
gtgaaagaactgaggctcaaggagtctgtgaggtcacttgctctgggtccccagctggca
gggggggacttgcgtgtgagcctgtgtccccgggtctggcctctacccctggaccagagg
atcccaccccatagctcagaagaccctcagcccgcagagacccagcgccgggtgcagccc
ccttcccggccggcctgggggcctcctgccctgccctcatcacacagctgcttgtcctgg
tcttcggggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (22)   
   UniProt (1)   
   RefSeq(pep) (21)   
DNA sequence (22)   
   RefSeq(nuc) (22)   
Protein domain (2)   
   Pfam (2)   
All databases (60)   

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