KEGG   Physeter catodon (sperm whale): 102986180
Entry
102986180         CDS       T06011                                 
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X2
  KO
K10373  tropomyosin 1
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad04260  Cardiac muscle contraction
pcad04261  Adrenergic signaling in cardiomyocytes
pcad04814  Motor proteins
pcad04820  Cytoskeleton in muscle cells
pcad05206  MicroRNAs in cancer
pcad05410  Hypertrophic cardiomyopathy
pcad05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    102986180 (TPM1)
   04820 Cytoskeleton in muscle cells
    102986180 (TPM1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    102986180 (TPM1)
   04261 Adrenergic signaling in cardiomyocytes
    102986180 (TPM1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    102986180 (TPM1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    102986180 (TPM1)
   05414 Dilated cardiomyopathy
    102986180 (TPM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pcad04812]
    102986180 (TPM1)
   04147 Exosome [BR:pcad04147]
    102986180 (TPM1)
Cytoskeleton proteins [BR:pcad04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     102986180 (TPM1)
Exosome [BR:pcad04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   102986180 (TPM1)
SSDB
Motif
Pfam: Tropomyosin CLZ Laminin_II Crescentin ERM_helical TMF_DNA_bd Laminin_I DUF3450 ATG16 ADIP CENP-F_leu_zip DUF745 Lebercilin DUF4200 DUF1664 XhlA DUF16 EzrA Fib_alpha
Other DBs
NCBI-GeneID: 102986180
NCBI-ProteinID: XP_023984475
Ensembl: ENSPCTG00005010565
UniProt: A0A2Y9T6R0
Position
11:55996056..56024485
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE
FAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLELNNM
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggat
cgagcggagcaggcggaggccgataagaaggcggcggaggacaggagcaagcagctggaa
gatgagctggtgtcgctgcaaaagaaactcaagggcaccgaagatgaactggacaaatac
tccgaggctctcaaagatgcccaggagaagctggagctggcggagaaaaaggccaccgac
gctgaagccgatgtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgtgcccaggagcgtctggcaacagctctgcagaagctggaggaggccgagaaggcagca
gatgagagtgagagaggcatgaaggtcattgaaagccgagcccaaaaggatgaggagaaa
atggaaattcaggagatccaactgaaagaggccaagcacatcgctgaggatgccgaccgc
aagtatgaagaggtggcccgtaagctggtcatcattgagagtgacctggagcgtgcagag
gagcgggctgagctctcagaaggcaaatgtgccgagcttgaagaagagttgaaaactgtg
acgaacaacttgaagtcactggaggctcaggctgagaagtactcgcagaaggaagacaaa
tatgaggaagagatcaaggtcctttctgacaagctgaaggaggctgagactcgggccgag
tttgcggagaggtcagtaactaaattggagaaaagcattgatgacttagaagagaaagtg
gctcatgccaaagaagaaaaccttagtatgcaccagatgctggatcagactttactggag
ttaaacaacatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (19)   
   Pfam (19)   
All databases (57)   

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