KEGG T06011: 102986823

Physeter catodon (sperm whale): 102986823

Entry

102986823         CDS       T06011

Symbol

EBF4

Name

(RefSeq) transcription factor COE4 isoform X2

K09103

early B-cell factor

Organism

pcad Physeter catodon (sperm whale)

Brite

KEGG Orthology (KO) [BR:pcad00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcad03000]
    102986823 (EBF4)
Transcription factors [BR:pcad03000]
Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    102986823 (EBF4)

SSDB

Motif

Pfam:

COE1_DBD COE1_HLH TIG

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

14:27249230..27305047

AA seq 706 aa
MARARGQAPGSGGRRRPRRGGAGTGPRGESAGLLLLLLQVLPPAAAAGPGRRSTRGAGGG
GVCWPGAAPAFPRDARLLLLLPPLPPQSPPPPPPPPPPSSAPAASSSWMDALPRGGLNLK
EEPLLPAGLGSVRSWMQGAGILDASTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLAMY
DRQGQPVEVERTAFIDFVEKDREPGGEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMS
KQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRFFLKFFLKCN
QNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATP
CIKAISPGEGWTTGGATVIVIGDNFFDGLQVVFGNVLVWSELITPHAIRVQTPPRHIPGV
VEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRA
ADLAEALYGVPGGNQELLLKRAADVAEALYSAPRAPAPLGPLAPSHPHSAVVGINAFSSP
LAIAVGDATPGPEPGYARSCGSASPRGFAPSPGSQQSGYGGGLGAGLGGYGAPGVAGLGV
PASPSFLNGSTATSPFAIMPSSPPLAAASSMALPAAAPTTSVFSFSPVNMISAVKQRSAF
APVLRPPSSPPQACPRAHGEGLPDQPFEDSDKFHSPARGLQGLAYS

NT seq 2121 nt +upstreamnt +downstreamnt
atggcccgggcccgcggccaggccccggggagcggcgggcggcggcggccgcggcggggc
ggcgcgggaaccgggcccaggggggagtcggccgggctgctgctactgctgctccaggtg
ctgccgcccgcggctgcggcagggccggggcgccggagcacgcggggcgccggcggcgga
ggcgtctgctggcccggcgctgcccctgcctttcctcgggacgcgcggctgctgctgctc
ctgccgccgctaccgccgcagtcgccgccgccgccgccgccgccgccgccgccgagctcc
gcgcccgcagcctcctcctcctggatggacgctctgccccgcggcgggctgaacctgaag
gaggagccgctgctgcccgccggcctgggctcggtgcgctcctggatgcagggcgcaggc
atcctggacgccagcaccgcggcgcagagtggcgtgggcctggcgcgagcacattttgag
aagcagcccccctccaacctcaggaaatccaacttcttccacttcgtgctggccatgtat
gaccggcaggggcagccggtggaggtggagcgtacagctttcatcgactttgtggagaag
gaccgagagcccgggggtgaaaagacaaacaacgggatccattatcgcctccggctggta
tataacaacggacttcggacagaacaggacctctatgtgcgtctcattgactccatgtcc
aagcaggccatcatctacgaggggcaggacaagaaccccgaaatgtgccgcgtgctactc
acccacgagatcatgtgcagccggtgctgtgaccggaagagctgtggcaaccggaatgag
acaccctcagaccccgtcatcattgacaggttcttcctcaagttcttcctcaaatgcaac
cagaactgcctaaagaatgcggggaatccccgagacatgcgccgcttccaggtggtggta
tccacaacggtgagcgtggacggacacgtgctggccgtgtccgacaacatgtttgtgcac
aacaactccaagcatggccgccgggcgcgccgcctggacccctccgaagctgccaccccc
tgcatcaaggccatcagtcccggggagggctggaccacgggcggcgccaccgtcattgtc
atcggcgacaacttcttcgacgggttgcaggtcgtgtttgggaacgtgctcgtgtggagt
gagctcatcacgccccacgccatacgggtgcagacgcccccacggcacatccctggggtg
gtggaggtgaccctgtcctacaagtccaagcaattttgcaagggagcccccggccgcttt
gtctacacagccctgaatgagcccaccattgactacggattccagaggctacagaaagtc
attcccagacaccccggagaccccgagaggctgcccaaggaagtgctgctgaagcgggcg
gccgacttggcggaggccctgtacggagtgcccggcggcaaccaggagctcctcctgaag
cgcgcagcagacgtggccgaggctctgtacagcgccccccgagcgcccgcgccgctcgga
cccctggcccccagccacccgcactccgccgtcgtgggcatcaacgccttcagcagcccg
ctggccattgccgtcggggacgccacgccagggccggagccgggctacgcgcgcagctgc
ggcagtgcgtccccccgtgggttcgcgcccagcccgggctcgcagcagagtggctacggc
ggcggcctcggagctggcctcggcggctacggggcgccgggcgtggccggcctcggtgtg
cccgcgtcccccagcttcctcaatggctccacggccacatcaccctttgccatcatgccc
tctagccccccgctggccgctgcctcctccatggccctcccggcggctgcccccaccacc
agcgtcttctccttctcgcctgtcaacatgatctccgctgtcaaacagaggagtgctttc
gcccccgtgctgcgcccacccagctccccaccccaggcctgccccagagcccacggagag
gggcttccagaccagccttttgaagattctgacaagttccactctccagctcgggggctt
cagggcctggcgtactcctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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