KEGG   Physeter catodon (sperm whale): 102987386
Entry
102987386         CDS       T06011                                 
Symbol
PUS1
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pcad  Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcad03016]
    102987386 (PUS1)
Enzymes [BR:pcad01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     102987386 (PUS1)
Transfer RNA biogenesis [BR:pcad03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    102987386 (PUS1)
 Prokaryotic type
    102987386 (PUS1)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 102987386
NCBI-ProteinID: XP_007126879
Ensembl: ENSPCTG00005015839
UniProt: A0A2Y9FMK6
Position
Unknown
AA seq 433 aa
MGLPSLRAAAWALRRACGPWTPRLGPRLLCLPPMAGNGDAPMPVGTKQEQDRKARRGWQG
TARIWEETEQQAKKLKSSEDGEQPRKLPKRKIVLLMAYSGKGYHGMQRNVGSSKFKTIED
DLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDLLEKINSHL
PSHIRILGLKRVTGGFNSKNKCDARTYFYMLPTFAFAHKDHDAQDETYRLRAETLGRVNR
LLACYRGTHNFHNFTSQKGPREPSARRYILDMFCEEPFVREGMEFAVIKVKGQSFMTHQI
RKMVGLVVAIVKGYAPESVLERCWGEAKVDVPKAPGLGLVLERVHFEKYNQRFGHDGLHE
PLDWAREEAEVTAFKEQHIYPTIISTERHERSMAQWLSTLPMHDFSATAHAAASPGTKVP
RPLEGSDGDGDSD
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggggctccccagtctgcgggcggcggcctgggccctgaggagagcctgcggaccgtgg
accccacgcctgggaccgcgcctcctctgtttgccccccatggcagggaatggggacgcc
cccatgcccgtggggaccaagcaggagcaggacaggaaggcccggcgtggctggcagggc
acggccaggatctgggaggaaacagagcagcaggcgaaaaagctcaagagcagcgaggat
ggggagcagcccaggaagctgcccaagcggaagatcgtgctgctcatggcctattccggg
aagggctaccacggcatgcagaggaatgttgggtcctcgaaattcaagaccatcgaagat
gacctggtgtccgccctggttcggtcgggttgtattcctgagaatcacggggaggacatg
cggaagatgtccttccagcgctgcgcccggacggacaagggtgtgtctgcggccggccag
gttgtgtccctgaaggtgtggctgattgacgaccttttagaaaagattaacagccacctt
ccgtctcacattcggatactgggactgaagagggtcacgggcggcttcaactccaagaac
aagtgcgacgccaggacctacttctacatgctgcccacgttcgccttcgcccacaaggac
cacgacgcgcaggacgagacgtaccggctgcgtgcggagacgctggggcgcgtgaaccgc
ctcctggcctgctacaggggcacccacaacttccacaacttcacctcccagaaggggccc
cgcgagcccagcgcccggcgctacatcctcgacatgttctgcgaggagcccttcgtgcgc
gaaggcatggagtttgcggtgatcaaggtcaagggccagagcttcatgacgcaccagatc
aggaagatggtggggctggtggtggccatcgtcaagggctacgcgcccgagagcgtgctg
gagcgctgctggggggaggccaaggtggacgtgcccaaggcgccggggctcggcctggtc
ctggagcgggtgcacttcgagaagtacaaccagcgcttcggccacgacgggctgcacgag
ccgctggactgggcgcgggaggaggctgaggtcacggccttcaaggagcagcacatctac
cccacgatcatcagcaccgagcgccacgagaggtccatggcccagtggctgagcaccctg
cccatgcatgacttcagcgccactgcccacgcggccgccagcccgggcactaaggtcccc
cgccccctggaaggcagcgacggggacggggacagtgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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