KEGG T06011: 102987937

Physeter catodon (sperm whale): 102987937

Entry

102987937         CDS       T06011

Symbol

RPAP3

Name

(RefSeq) RNA polymerase II-associated protein 3

K23002

RNA polymerase II-associated protein 3

Organism

pcad Physeter catodon (sperm whale)

Brite

KEGG Orthology (KO) [BR:pcad00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcad03021]
    102987937 (RPAP3)
Transcription machinery [BR:pcad03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     102987937 (RPAP3)

SSDB

Motif

Pfam:

TPR_1 RPAP3_C TPR_2 TPR_8 TPR_11 TPR_19 TPR_16 TPR_12 TPR_9 TPR_14 TPR_7 TPR_6 ANAPC3 MIT

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

6:90848133..90902327

AA seq 682 aa
MTSASKAIELQLQVKQNAEELQDFMRDLENWEKDIKQKDMELRRQNGVPEENLPPIRNGN
LRKKKKGKVKESSKKTKDENTKNRIKSYDYEAWAKLDVDSILDELDKEESTHDSVSQESE
SEEDGIHVDSQKALALKEKGNKYFKQGKYDEAIECYTKGMGADPYNPVLPTNRASAYFRL
KKFAVAESDCNLAIALNRSYTKAYARRGAARFALQRLEDAKKDYEKVLELEPNNFEATNE
LRKINQALTSKENSYPEEDDTMIKSAEGEKKQIEEQQSKQQAISEKDRGNAFFKEGKYER
AIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTAR
TFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKKELIEKGHWDDVFLDSTQRQNVIKPI
DNPPHLGSTVNLLKAQMMVSKYFLIKKPLKKLIIEETGNLIQTVDVPDSTTTAAAPERNP
INPAKETATTGTSKKNSSQDDLLPASDIPKAKVLKIEEISDTSALQPEVNLKKDVCQSFS
EKISIEVDKTPAQFIRTALPPVPANSFQLESDFRQLKNSPDMLYQYLKQIEPSLYPKLFQ
KNLDPDVFNHIIKILHDFYIEKEKPSLIFEILQRLSELRRFDMAVMFMSEPEKKIARVLF
NHIDKSGLNDNSVEELRKRYGG

NT seq 2049 nt +upstreamnt +downstreamnt
atgacttcagcaagtaaagcaattgaattacaactacaagtgaaacaaaatgcagaagag
ttacaagactttatgagggatttagaaaactgggaaaaagatattaaacaaaaggatatg
gaacttagaagacagaatggtgttcctgaagagaatttacctcctattagaaatgggaat
cttaggaaaaagaagaaaggcaaagttaaagagtcatctaaaaaaaccaaagatgaaaac
acaaaaaacaggataaaatcttatgattatgaggcatgggcaaaacttgatgtggacagt
atccttgatgagcttgacaaagaagagagtacccatgattctgtgtctcaagaatcggag
tcagaagaagatgggattcatgtagattcacaaaaggctcttgctctaaaagaaaagggc
aataaatacttcaaacaaggaaaatatgatgaagcgattgaatgttacaccaaaggcatg
ggtgctgatccatataatcctgtgttgccaacaaacagagcatcagcatactttagactg
aaaaaatttgctgttgctgagtctgattgtaatttagcaattgccttgaatagaagttat
acaaaggcttatgcaagacgaggtgctgctcgatttgctttgcaaagattagaggatgcc
aaaaaagattatgaaaaagtattagaactggaacccaataactttgaagctacaaatgaa
ctcagaaaaattaatcaggctttaacttccaaagaaaactcatatccagaggaagatgat
acaatgattaagtcagctgaaggagagaaaaaacaaatcgaagagcaacagagtaaacag
caggccatttcagagaaagatcgggggaatgcatttttcaaagaggggaaatatgaaaga
gcaatcgaatgctatactcgagggatagcagcagatggcgctaatgcccttcttccagct
aacagagcaatggcctatctgaagattcagaagtatgaagaggctgaaaaagactgcaca
caagctattttattagatggctcatattctaaagcttttgccagaaggggaactgcaaga
acatttttgggaaagctcaatgaggccaaacaagattttgaaactgttttacttctggaa
cctggaaataagcaggcagtgactgaactttcaaaaattaaaaaggaattaattgagaaa
ggacactgggatgatgtctttcttgattctactcaaaggcaaaacgtgataaaacccatt
gataatccgcctcatcttggatcaactgtaaacttgctgaaggctcagatgatggttagc
aagtattttttaattaagaaaccactcaagaagcttattattgaagaaactggtaatttg
atacagactgttgatgtgccagacagcactactactgctgctgctccagagcgtaatcct
attaatccagctaaggaaacagcaaccactggcacaagtaagaagaactcaagccaagat
gaccttttgcccgcaagtgatatcccaaaagcaaaagtattgaaaatagaagaaatcagt
gatacgtcagctctgcaacctgaagtcaatttgaaaaaggatgtatgtcagtctttcagt
gagaagatttctatagaggtggacaaaacacctgctcagtttatcaggactgctcttcct
ccagttcctgcaaactcatttcaacttgaatctgatttcagacaactgaagaattcccca
gatatgttgtatcaatatttgaagcaaattgaaccatccttgtatcccaagctgtttcag
aaaaatctagatccagatgtattcaaccatatcattaaaattcttcatgacttttacatt
gagaaagaaaagccatcactcatctttgaaatcttgcaaagactttctgaactaagaagg
tttgatatggcagtgatgtttatgtcagaacctgagaagaaaattgcacgtgtattattc
aatcacatagacaaatcaggactgaatgataattctgttgaagaactcaggaaaagatac
ggtggttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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