KEGG   Physeter catodon (sperm whale): 102988978
Entry
102988978         CDS       T06011                                 
Symbol
CHD3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3 isoform X4
  KO
K11642  chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102988978 (CHD3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102988978 (CHD3)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102988978 (CHD3)
  Chromatin remodeling factors
   NuRD complex
    102988978 (CHD3)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C PHD DUF1087 Chromo CHDNT HDA2-3 ResIII DEAD PHD_2 AAA_22 LPD11
Other DBs
NCBI-GeneID: 102988978
NCBI-ProteinID: XP_023983786
Ensembl: ENSPCTG00005020057
UniProt: A0A2Y9SYN4
Position
Unknown
AA seq 1888 aa
MRPLIAKKNPKIPMSKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAV
SSATPIAPSGPPALPPPPAADIQPPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKKLRGKK
MAPLKIKLGLLGSKRKKGGSYVFQSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLK
RGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDP
ELDRAPEGKWSCPHCEKEGVQWEAKEEEEDYEEEGEEEGEKEEEDDHMEYCRVCKDGGEL
LCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQ
QADGNPDAPPARPLQGRSEREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMD
EPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYH
YLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGD
GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT
IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE
NEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRL
KNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIS
KEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALN
SRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKM
LRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQ
QFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRA
SVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEE
DSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIK
QEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSE
EEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWG
MPPQDAFTTQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQV
LTRIGVMSLVKKKVQEFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASAAN
SPCTSKPATPAPSEKGDGIRTPLEKDEAENQEEKPEKNSKIGEKMETEADTPSPAPSLGE
RLEPRKIPLEDEVPGVPGEMEPEPGYRGDREKSATESTPGERGEEKPMDGQEHRERPEGE
TGDLGKREDVKGDRELRPGPPRDEPRSNGRREEKAEKPRFMFNIADGGFTELHTLWQNEE
RAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLE
MKNKFLARRFKLLEQALVIEEQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLS
KESLAGNKPANAVLHKGKGRGGPARGRAHNAASEPAGGVAERHEGGRDPPASHAVPNTPH
RSPPSDVRAQHPQPAGQQGHGASPHTGLPPGSIRYTSGVRGGLQRRTRRGPGRRRRQLQP
DACRVLHHSRHQRPSSAGEEGEGNGGGIGVRRAGSEGAPSRGGDLYRRLTGSQACPSPRP
RPRGRPPAQALGPAASPPPSPPLGPPLG
NT seq 5667 nt   +upstreamnt  +downstreamnt
atgaggcccctgattgctaagaagaatcctaagatcccaatgtctaagatgatgactatc
cttggggccaagtggagagagttcagcgccaacaaccccttcaaggggtcggcagctgct
gtggcggcagcggcggcggcagcggccgcagctgtagctgagcaggtgtcagctgctgtc
tcatcggccacccccatagcaccttccggaccccccgcccttccaccaccccctgctgct
gatatccagcccccacccatccgaagagccaaaaccaaagagggcaaaggtccaggccac
aagaggcggagtaagagtccccgagtgcctgatggacgcaagaagcttcggggaaagaag
atggcaccactcaaaatcaaactagggctgctgggtagcaagaggaagaagggaggctcg
tatgttttccagagtgacgagggccctgaaccagaggctgaggagtcagacctggacagt
ggcagtgtccacagtgcctcaggccgccctgatggccctgtccgcaccaagaaactaaag
agaggccggccaggaaggaagaagaagaaggtcctgggctgtcctgcagtggccggggag
gaggaggttgatggctacgagacggatcaccaggattactgtgaggtgtgccagcagggt
ggggaaattattctgtgtgacacctgccctcgtgcctaccacctcgtctgccttgatcct
gagcttgaccgggctcctgagggcaaatggagctgcccccactgtgagaaggagggggta
cagtgggaggccaaggaggaggaggaagactatgaagaggagggggaagaggagggggag
aaggaggaagaggacgaccacatggagtactgccgtgtgtgcaaggatggcggggagctc
ctgtgctgtgacgcctgcatctcctcctaccacattcactgtctgaaccccccgctgcct
gacatccccaacggcgaatggctgtgtccccgatgcacatgtcccgtgctgaaaggccgt
gtgcagaagatcctgcactggcggtggggggagccccccgtggcagtgccagccccccaa
caggcagacgggaatccagatgccccacccgcacgtcctcttcaaggcagatcggagaga
gagttctttgtcaagtgggtaggactgtcctactggcactgctcctgggccaaggagctt
cagctggaaattttccacttggtaatgtaccgaaactaccaacggaagaatgacatggac
gagcccccacccctcgactacggctctggtgaggatgatgggaagagtgacaagcgcaag
gtgaaggacccgcactatgccgagatggaggagaagtactatcgtttcggcatcaagcca
gagtggatgaccgtccaccggatcatcaaccacagtgtggataagaagggaaattaccac
tatctagtgaaatggagggacttgccatatgaccagtccacgtgggaggaagatgaaatg
aacatccctgaatatgaagaccataaacaaagctactggagacaccgagaactaattatg
ggggaggaccccgcccagccccgcaagtataagaagaagaagaaggagctgcagggtgat
gggcctcccagctctcccactaatgatcctacagtgaaatacgagactcagccacggttc
atcacagccactggaggcacactgcacatgtatcagctggaggggttgaactggctacgc
ttctcgtgggcccagggcactgacacgattctggctgatgagatgggactgggcaagacc
atacaaaccatcgtcttcctctactcactgtataaggagggccacacaaagggtcccttc
ctggtgagcgcccctctctccaccatcattaactgggagcgggagttccagatgtgggca
cccaagttctatgtggtgacatacacgggtgacaaggacagccgagccatcattcgtgag
aatgagttttcctttgaagacaatgccatcaaaggtggcaagaaagcttttaagatgaag
agggaggcgcaagtgaagttccacgttctcctgacatcatatgagctgatcaccattgac
caggcagctcttggctccatccgctgggcctgtctcgtggtggatgaggcccatcggctc
aagaacaaccagtccaagtttttcagggtcctcaatggctacaagatagatcataagttg
ctgctgacagggactccattgcagaataatctggaggagctcttccatctgctgaacttc
ctcaccccagagaggtttaacaatctggaaggcttcctggaggagtttgccgacatatcc
aaagaagaccagattaagaaacttcatgacttgctggggccacatatgctgaggaggctc
aaggctgatgtctttaagaacatgccggccaagacggagctcatcgtccgcgtggagctg
agccccatgcagaagaaatactacaagtatatcctgacccgaaattttgaggccttgaat
tcacgaggaggtgggaaccaagtgtcattgcttaacatcatgatggatcttaagaagtgc
tgcaaccatccatatctctttcctgtggctgctatggagtcccctaaacttcccagtggg
gcatatgagggtggggcacttattaaggcatctgggaagctcatgctactgcagaagatg
ctgcggaagctgaaggagcaaggacacagagtgctcatcttctcgcagatgaccaaaatg
ttagacttgctagaggacttcttagactacgaaggctacaagtatgagcgcattgacggc
ggcatcactggtgccctgaggcaggaggccatcgatcgcttcaacgctcctggggcccaa
caattctgcttcctcctgtccacccgggctggaggcctgggcatcaatctggccactgcc
gacactgtcatcatctttgattcagactggaacccccataatgatatccaggccttcagc
cgtgctcatcggatcggccaggccaacaaagtgatgatttaccggtttgtgactcgcgca
tcagtggaagagcgaatcacacaggtggccaagagaaagatgatgctgacgcatctggtg
gtgcggcctgggctgggctccaaggcgggctccatgtccaagcaggagctggatgacatc
ctcaaatttggcaccgaggagctatttaaggatgaaaatgagggggagaacaaggaggag
gacagcagtgtgattcactatgacaacgaggccatcgctcggctcttggaccggaaccag
gatgcaactgaggacactgatgtgcagaacatgaatgagtatctcagctccttcaaggtg
gcccagtacgtggtgagggaagaagacaagattgaggaaattgaacgagagatcatcaag
caagaggagaacgtggatcctgactactgggagaagctgctgagacaccactatgagcag
cagcaggaagacctggcccgaaacctcggcaaaggcaagagggtccgcaagcaggttaat
tacaacgacgctgctcaggaggaccaagataaccagtcagaatactcagtgggatcagag
gaggaggatgaagactttgatgagcgtcctgaagggcgtcgacagtccaagaggcagctc
cggaatgaaaaggataagccactgcctccactgctggctcgagttgggggcaacattgag
gtgttggggttcaacacccgtcagcggaaggccttcctcaacgctgtgatgcgctggggc
atgccaccacaggacgccttcaccacccagtggctggtgcgggacctcaggggcaagact
gaaaaagagttcaaggcctatgtgtctttgttcatgcgccacctctgtgagcccggggca
gacggctctgaaacctttgctgacggggtccctcgggagggactgagtcgccagcaagtg
ctgacccgcattggagtcatgtctctcgtcaagaagaaggttcaggagtttgagcacatc
aatgggcgctggtctatgccggagctgatgcccgaccccagtgctgactccaagcgctcc
tccagagcctcctctcctaccaaaacgtctcccaccactcctgaggcttctgctgcaaac
agtccttgcacctcaaaacctgctactccagctcccagtgagaaaggagatggcataagg
acgcctctggagaaggatgaagcagaaaaccaggaggagaagccagagaagaatagcaaa
attggggagaagatggaaacagaggctgatacccccagcccagccccatcacttggggag
cggctggagccaaggaagattcctctagaggatgaggtgccaggggtacctggagagatg
gagcctgaacctgggtaccgtggggacagagagaagtcagccacggagtcgacaccagga
gagaggggggaggagaagccgatggatggacaggaacacagggagaggccggagggggag
acgggggatttgggcaagagagaagatgtaaaaggggaccgggagcttcgacctgggcct
cctcgagacgagccgcggtccaacgggcgacgtgaggagaaggcagagaagccgcggttc
atgttcaatattgcagatggtggcttcacagagctgcacacgctgtggcagaatgaggaa
cgggcagctatctcctcggggaaactcaatgagatctggcaccgaagacatgactattgg
cttctggctgggattgtcctccatggctacgcacggtggcaggacatccagaatgatgct
cagtttgccattatcaacgagccatttaaaactgaagccaataaggggaactttctggag
atgaaaaataagttcctggcccggagattcaagctcctggagcaggcgctggtgattgag
gagcagctgcggcgggcggcctacctgaacctatcacaggagccggcgcaccccgccatg
gccctccacgcccgcttcgccgaggccgagtgcctggccgagagccaccagcacctctcc
aaggagtcgttggcggggaacaagccggccaacgccgtgctgcacaagggtaagggccgc
ggcggccccgcgcgggggagggcccacaacgctgcttctgaaccagctggaggagttgct
gagcgacatgaaggcggacgtgacccgcctgccagccacgctgtcccgaataccccccat
cgcagcccgccttcagatgtccgagcgcagcatcctcagccggctggccagcaagggcac
ggagcctcaccccacaccggccttccccccgggtccatacgctacacctccggggtacgg
ggcggccttcagcgccgcacccgtaggggccctggccgccgcaggcgccaattacagcca
gatgcctgcagggtccttcatcacagccgccaccaacggccctccagtgctggtgaagaa
ggagaaggaaatggtgggggcattggtgtcagacgggctggatcggaaggagccccgagc
cggggaggtgatctgtatagacgactgaccggatcccaggcctgcccttcacccaggccc
cgtccccgaggccgacccccagctcaggctctggggcctgctgccagtcctccgccttcc
ccaccccttgggcccccgctgggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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