KEGG   Physeter catodon (sperm whale): 102996223
Entry
102996223         CDS       T06011                                 
Symbol
PDE12
Name
(RefSeq) 2',5'-phosphodiesterase 12
  KO
K19612  2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
Organism
pcad  Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102996223 (PDE12)
   03029 Mitochondrial biogenesis [BR:pcad03029]
    102996223 (PDE12)
Enzymes [BR:pcad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     102996223 (PDE12)
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102996223 (PDE12)
Mitochondrial biogenesis [BR:pcad03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    102996223 (PDE12)
SSDB
Motif
Pfam: PDE12-like_N Exo_endo_phos
Other DBs
NCBI-GeneID: 102996223
NCBI-ProteinID: XP_007119226
Ensembl: ENSPCTG00005021893
UniProt: A0A2Y9FBI6
Position
18:complement(36290654..36297925)
AA seq 609 aa
MWRLPGARAALRGVRTAVERHSRAEAATETAAGAMERAVVRCVPSEPKLSLSFALADGSH
KNMQRDQSEPLGRALSRIATNALKGHAKAAAAKKSKKNRPNASGGVSCAGPGPEPAAACE
PVVKLYYREEAVAEDVLNVDAWQDGAVLQIGDVKYKVERNPPAFTELQLPRYIMAGFPVC
PKLGVEFGDPAGSLFRWYKETKPGAAEPDGGGPSSLSPSSPSPGWTETGVDERVYTPSNA
DIGLRLKLHCTPGNGQRFGPSRELESVCPVEAGPGTCTFDHRHLYTKKVTDDALIRTVSY
NILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRNVFTDS
LVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDIAFHDALQSDPLHKELLEKLAL
YPSAQERVLQRSSVLQVSVLQSTKDSSKKICVANTHLYWHPKGGYIRLIQMAVALAHIRH
VSCDLYPSIPVIFCGDFNSTPSTGMYHFVISGNIPEDHEDWTSNGEEERCNMSLTHFFKL
KSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPTHEEVTTHQALPSVSHPSDHL
ALVCDLKWK
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtggaggctcccaggcgcccgcgccgcgcttcgtggggtccgtacggcggtggagcgg
cacagtcgggccgaggcggcgactgagactgcggcaggcgcgatggagcgcgctgtggtg
cgctgtgtgccctcggagcctaagctaagtctgtcgttcgcgctggccgacggcagccac
aagaacatgcagcgcgaccagagcgagccgctgggtcgggcccttagccggatcgctacc
aatgccctcaaaggccacgcgaaggcggctgccgccaagaagagcaagaagaaccggcca
aacgcaagcggcggcgtgtcctgtgcggggcctgggcccgagccggctgcagcctgcgaa
cccgtggtgaagctgtactaccgggaggaggcagtggctgaagacgtgctcaatgtggac
gcctggcaggacggtgcggtgctgcagatcggcgatgtcaagtacaaggtggagcgcaac
cctcccgccttcaccgagctgcagttgccgcgctatatcatggccggcttcccggtgtgc
cccaagctcggcgtcgaatttggggatcccgccggctccctcttccgctggtacaaggaa
accaaacccggagcggcggaacctgatggcggaggcccctcatcgttgtctccctcttcg
ccctctcctggttggactgagacgggtgtggacgagcgcgtctacaccccgtccaatgcc
gacatcgggctacggctcaaacttcattgcaccccaggcaatgggcagcgctttgggcca
agccgggagttggaaagtgtgtgtccagtggaggccgggcccggcacctgcacctttgac
caccggcatctgtacaccaagaaggtgacggacgacgcgctcatccgcactgtctcctac
aacatcctggccgacacatacgcccagactgagttttcgcggacggtcctgtacccgtac
tgtgccccttacgccctggagctcgactaccgccagaaccttatccaaaaggaactcacg
ggctacaacgccgacctcatctgtttgcaggaagttgaccgcaatgtgtttacagacagc
ttggtgccggccctggaggcctttgggctagagggcgtgtttcgaatcaagcagcacgaa
ggcctggccactttctaccggaagtccaagttcagcctccttagccagcatgacattgct
ttccatgatgccctgcagtctgacccacttcacaaagaactgctggagaaactggctttg
tacccatcagcgcaggagagggtgctccagagatcttctgtacttcaggtttctgttctt
cagtctacaaaggactcttctaaaaagatatgtgttgctaatacccatctctactggcac
cccaaaggtgggtacattcgtctcattcaaatggcagtagccttggctcacattagacac
gtctcttgtgatctgtatcccagcataccagttatattttgtggggactttaatagtacc
ccatcaacaggaatgtatcactttgtcatcagtggcaatattccagaggatcatgaagac
tggacttccaatggggaagaggaacgatgcaacatgtctcttacccatttcttcaaactg
aaaagtgcttgtggtgaacctgcttacacaaattacgtcggtggctttcatggatgtctg
gattacattttcattgacttaaatgctttagaggttgaacaggtgattccattacctact
catgaagaagttaccacccaccaggccttacctagtgtttcccatccctctgatcactta
gcacttgtatgtgatttaaaatggaaatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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