KEGG   Paraburkholderia caffeinilytica: DSC91_000367
Entry
DSC91_000367      CDS       T06448                                 
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
pcaf  Paraburkholderia caffeinilytica
Pathway
pcaf01501  beta-Lactam resistance
pcaf02024  Quorum sensing
Module
pcaf_M00642  Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:pcaf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DSC91_000367
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    DSC91_000367
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcaf02000]
    DSC91_000367
   01504 Antimicrobial resistance genes [BR:pcaf01504]
    DSC91_000367
Transporters [BR:pcaf02000]
 Other transporters
  Pores ion channels [TC:1]
   DSC91_000367
Antimicrobial resistance genes [BR:pcaf01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    DSC91_000367
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    DSC91_000367
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    DSC91_000367
SSDB
Motif
Pfam: OEP PEP-utilisers_N
Other DBs
NCBI-ProteinID: AXL48813
Position
1:368439..369923
AA seq 494 aa
MVRQRFFNAAARRCQDRGLASASRTAAALRGLCVATVCALSLSACVDVSMPAYKRPDTPA
KASWSDQKGSPVSASATIEQDWWKGFHDPYLDTLIAKAIAGNFDIKVLAARIDVAGTQIG
EAKAGALPTMDLGGGADFQKTTGQTFSKQYNVATQVSWDIDIWGKVEKGVQAQKAEFHAS
EADWRAGYLELVANVSSTYFQILQFDDQIEQQQQTLVTNRQILAIYDGQRRNGLIPQTQV
LRQQAEINRLTNQLLELRRSRDVANNALCTLLGVPAGEFQLPKGHLQQRVQLPVVPEGLP
AQLLARRPDVVAAEFRVLEAYDLVGQAKLAQLPTINLTGHGGTASFALTDLLKSFTYGFM
PSINIPLLDPGVRAHVKVTQAQSTVAEQQYRVAVMGAFEEVENALVNLNSHKAQRVELQQ
EVSRLQTVAEQIESQLRLGLVSQLEVFETERTLLEAQQELLANHQLILSDTVLLYKALGG
GWPSVDVQAEVKEH
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggttcgtcagcgctttttcaatgccgcggcgcggcgttgtcaggaccgtgggctggcg
agtgcgagccgcacggccgcggcgctgcgcggactctgcgtcgcaacggtctgcgcactg
tcgctgagcgcgtgtgtcgacgtcagcatgcccgcctacaagcggcccgatacgcccgcc
aaggcgtcgtggtcggatcagaaaggctcgccggtatcggcgtccgccaccattgagcag
gactggtggaagggcttccacgatccgtatctggacacgctgatcgcgaaagcgatcgca
ggcaacttcgatatcaaggtgctggccgcgcgtatcgacgtggccggcacgcagatcggc
gaggccaaagccggtgcgttgccgaccatggatctcggcggcggcgccgacttccagaag
actacgggccagacgttttccaagcagtacaacgtcgcgacgcaggtgagctgggacatc
gatatctggggcaaagtggagaagggcgtgcaggcgcaaaaagccgagttccacgcaagc
gaagcggattggcgcgccggttatctggaactggtggcgaacgtctcgagcacctacttc
cagatcctgcaattcgacgaccagatcgaacagcagcagcaaacgctggtcacgaaccgg
cagattctcgccatctacgatggtcagcgccgcaatggcctcattccgcaaacccaggtg
ttgcgtcagcaggccgagatcaaccgtctaacgaatcagctgctcgaactgcgccgctcg
cgcgatgtcgcgaacaacgcgttgtgcacgctgctcggcgtgccggcgggcgagttccag
ttgcccaaagggcatttgcagcaacgcgtgcaactgcccgtagtgccggaaggcttgccc
gcgcagctccttgcacggcgccccgatgtggtggccgccgagttcagagtgctggaagcc
tacgatctggtcggccaggccaagctcgcgcaattgccgaccatcaacctcaccggccac
ggcggcacggcgagttttgcactgaccgatctgctgaagtcgttcacctacggattcatg
cccagcatcaacatcccgctgctcgatcctggcgtgcgtgcgcatgtgaaagtcacgcaa
gcgcaatcgacggttgccgagcagcagtatcgggtagccgtcatgggcgcattcgaggaa
gtggagaacgcgctggtcaatctgaattcgcacaaggcgcagcgtgtggaattacagcag
gaggtgtcgcgtttgcaaaccgtcgccgagcagatcgagtcgcaattgcgtctgggcctg
gtgtcgcaactggaagttttcgaaactgaacggaccttgctggaagcgcaacaggaactg
ctcgccaatcatcagctgattctgtccgacacggtgttgctttacaaggcgctgggcggc
ggttggccgagcgtggatgtgcaggcggaagtaaaggaacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (2)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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