KEGG   Pomacea canaliculata (golden apple snail): 112575581
Entry
112575581         CDS       T05881                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188 homolog
  KO
K14311  nuclear pore complex protein Nup188
Organism
pcan  Pomacea canaliculata (golden apple snail)
Pathway
pcan03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112575581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcan03019]
    112575581
Messenger RNA biogenesis [BR:pcan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112575581
SSDB
Motif
Pfam: Nup188_N-subdom_III
Other DBs
NCBI-GeneID: 112575581
NCBI-ProteinID: XP_025113317
Position
LG11:complement(2399832..2429421)
AA seq 1797 aa
MAGVKPTVDSSSNRILWQFITGAGLLRPKELIYQELNKNKGRLVNGLLYYKPASGNPGDA
LKKERNLSGLQLEFTLKLSQFLGLDEVLSHDLFCAFLINDYRGSKKTLKHVLSHERHSQA
LILKIRDFFFTERLYLLRCLHYICVYVETDHPYKDAYADFLSSVQSDTEKLQNKILKQLD
AICNQQPPSVEKNGVMMTEVSVLAWIMQNLKEQCELLELLFLLNKVYEMEAKTLCTFLEL
FKKQGFGMRQTYKHLVDESTVKYLKRISYLEMLVVLEAMDVENAMFCWTNNNYDDHVILR
SSKDFQDVNNEVSKLGSDPVHSPILLGWTMVRHLYTDRDPEKKDAAEIHKMGNVALKLGV
FRVLLDVLNTESFSNDTYLAALVQCQVYRLLNAVLSVFHEDTLGNSVLLYEVCSKLLRQP
SVAEEVWQKDSALWLLYESTISYFPFEFTRFIKMSVDLASASSFSAGKVRDLLQDLSMYT
EYLDNIQEKDLTVTHEPNVFMLNVDRKPYAAGDLTIYRGQRGQVLDQSAVSQRLAASLTG
PLIRWETNYNGWMLLICEVQELLRQITLGAGMVEPAQVERVTLIMELIQEVVKVDADTAE
DFTIFLSLCFQVVHRFSMLKPTPLDLLGKTMGCLMSAARYKPKEVWHQMKQTGLLPYLTE
NVDDIGEVLTGRGLHPGILGSIMAGTECPQGRYPLTLTVLTLALELVQSFSKEGLEEELQ
PCVLYILRDIFPQFRKWRYSDLVQRKKIGQQCLTLFNKILNLSAQQNKTKKVKTMASRPT
LHEVCVYSLLFTEAGKALMEIVATGVDNVEAALVQQGSVTEGSGIDLIELIQLSLSLLNQ
LLLLRPPDLPLSPVEQALFWQPAGRQSQHVVATVAQYIYHRHNPKLPIMATRLLRHLAVM
SPMSILACLGNDAEPIRDMYLTRLQAVSEDLRLKVAILELLSVCVETQPGLIEIFFDVQG
QSTDSGEGKKDLKLGRSSCLQTLLTLMEVNKQNTYMCHPELLCACLDLVHSLWHGRRETA
MEVLRAKQSFWASVTAPLKREVTEVHEESDFPLRLTEMRIAAFAFRILAQEIYTVTGTSL
DTQLKSCLKDLGKDDWFIYWSKFIKQSLMAEQSQEKPIHGMLENPVILLLKAWRSFLIVT
SKFKLLDELQVTDIKKEHIIHHLLEGLLAQFSGELSSLNMKIATILAALYFMLLRSWIGS
ISKPVAILVSLRGAAELTNSVSETLIPSVQIGLIGALNLLLQRARGELSSSAKIPPPTVA
TLLPVVCPMLPHSTRQLPSPAELAKTRHDEETTGKGRSDNLAESKLMLQVTLCSLLTEII
EATDPQLWLPSLQKHCVLAALLVSLEDYMKAKQSMPYIHSGLLLLTAIAEKEKGAAVLTM
SDFTAHTCLAVGSLYSKEEMFATHVLSSKASAGTSGSSISWYGLYCMSVNLYTLLLHKLG
FSFLDDALNFLGAHQDRMQQSLDLAQQTLLEPAMIEAECTCLFLHQMALYRRQWRLHLPQ
VMAKLLMSLLNMLQTFISLLIRPRYLQHLLEHGKDGDKGRYPLQSSPLLHHQTSTEDIEQ
PSAQLLQTENSMMKILGKSFAVLRHFTPDLCLALLDQSMDMCEFEPLVDLGFSTPSVDHQ
SPLTFGSLISCVSACLRQLSKVDAKLHSPHKVLSPHRRLSRTVSVSETQTQTSRSLLLFI
MENCLTLTLSQACRNLREPALPQREKQFLKRELSTELNSFLVSLARHLRRGTPGSPGDKS
VFNSPHAGSVSTLNTSSATNVSAQQSLSRSQSQTCFSSSNDQQFFRLVQEFVKKVLR
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggcgggagttaaacctacagttgacagctccagcaatcgcattttatggcaattcatc
actggtgcaggcctattgcgtccaaaggaattgatttaccaagaactgaacaaaaacaaa
ggacgactggttaatggacttctgtattataagccagcaagtggaaatcctggtgatgca
cttaaaaaagagagaaatctctcaggcctgcagctggaatttactctaaagttatctcag
tttctgggcttggatgaagtgctttctcatgatctgttttgtgcctttttgatcaatgat
taccgtggatctaagaaaaccttgaagcatgttttgagtcatgagagacactcccaggca
ctcatcttgaaaatcagagattttttcttcacagaacgactttatctgttgcgatgtctg
cactatatttgtgtttatgtagaaacagatcatccgtacaaggatgcgtatgctgacttc
ttaagcagtgttcagagcgacacagaaaaattacaaaacaagatactgaagcagctagat
gctatttgcaaccagcagccaccttcagtggagaagaatggtgtcatgatgactgaagtc
agtgtgttagcatggatcatgcagaatctcaaagaacagtgtgagcttctggagctgctg
tttctgcttaacaaggtttatgaaatggaagccaagactctctgtacattcctggagctg
ttcaagaaacaaggatttggaatgcgacagacctacaaacatctggttgatgaatctaca
gtcaagtatttgaagagaataagctacctggagatgctggttgtgttggaagcaatggat
gtggagaatgccatgttctgttggaccaacaataactatgacgatcacgttattttgaga
agcagtaaagatttccaggatgttaacaatgaggtgagcaaactgggatcagatcctgtc
cacagccccatcctgctgggctggactatggtacgccacttgtacactgaccgagaccct
gaaaagaaggatgctgctgaaatccacaaaatgggaaatgttgccttgaaacttggcgtg
ttcagagtgctactcgatgttcttaacacagaatcattcagtaatgacacttatctggca
gcattggtgcagtgccaggtgtatagactcctgaatgctgtgctatctgtatttcatgag
gacaccttaggaaactctgtgcttctttatgaggtttgcagtaaactgcttcgccagcca
tctgtagcagaagaagtgtggcagaaggatagtgctctgtggctgctgtatgagtcgacc
atatcttactttccatttgaattcactcgtttcattaaaatgagtgtagatcttgcatct
gccagttccttcagcgcaggaaaggtcagagatcttctgcaggacttaagcatgtacact
gagtatctagacaacatccaagagaaggatctgacagtcacccatgagcccaatgttttc
atgctaaatgtggatagaaaaccctatgctgctggtgatctgacaatctacaggggacag
agaggacaagttcttgatcaatcagctgtctcgcaacgcctggcagccagcttgacaggg
ccgctaatacgatgggaaacaaactacaatgggtggatgctgttaatatgtgaggttcaa
gaacttctgcggcagatcacactaggagcgggcatggtagaacctgctcaagtggaaaga
gtcaccctgataatggagctcatacaggaagttgttaaggtggatgctgatacagcagaa
gacttcacaatcttcctcagtttatgtttccaggttgttcacagattctccatgctaaaa
cccacaccccttgacttgcttggcaaaactatgggctgcttgatgtctgctgcacgttac
aagcccaaagaggtgtggcaccaaatgaaacagactggtctcttaccgtacctgacggaa
aatgtagatgacattggagaggtgctcactggtagagggctacatccagggatactgggc
tccatcatggctggaacagaatgcccacaaggccgctaccctctcactctgactgttctc
acccttgctctggagcttgtacagtcattttccaaagaggggttagaggaagaactacaa
ccatgtgttctgtatatcttaagagatatttttcctcagttccgtaaatggcgctactct
gacctggtacagcggaaaaagattggccagcagtgtttgactctgttcaacaagattctc
aacttgtcagcccagcagaataagaccaagaaagtgaagactatggcttcaagacctact
ttgcatgaggtgtgtgtctatagtctactgttcacagaagcaggcaaagcattgatggag
attgtggctacaggtgtagacaatgttgaggcagcccttgtgcagcagggaagtgttaca
gagggtagcggtattgatctgattgagcttatccagctgtctctctccttgctgaaccaa
ctcctgctcctgcgacctccagacctacctctctcacctgttgagcaggctctcttctgg
cagccagctgggcgtcaaagccagcatgtggtggcaacagtggcccagtacatttaccac
agacacaaccctaagctaccgataatggcaacccgcctgctccggcatcttgcagtgatg
tcacccatgtcgattttggcatgcctaggcaatgatgctgagccaatacgtgatatgtac
ctgacccgcttgcaagcagtgtctgaggatttacgactgaaagtagccatccttgagttg
ctttctgtctgtgttgagacacagccgggccttattgaaatattttttgacgtccagggt
caatctacagattcaggagaaggcaagaaggatctgaagctaggacgaagcagttgtttg
cagacattactgactttgatggaggtcaacaaacagaacacctatatgtgccatcctgaa
cttctgtgtgcttgccttgaccttgttcactctttgtggcatggcaggcgagagactgcc
atggaggttttacgagcaaagcagtcattttgggccagtgtcacagctcctttgaagcgg
gaggtcacagaggttcatgaagagtcggactttccattgcgactgactgaaatgagaata
gcagcttttgccttcaggattctggctcaagagatctatacagtgactggcaccagtcta
gatactcagttgaagagctgtttaaaagatctgggtaaggatgactggttcatctactgg
tccaagttcatcaagcaaagtttaatggcagaacaaagtcaggaaaagcctatccacggc
atgttagagaacccagtcattctgctgttgaaggcttggcgcagcttcctcattgttacc
agcaaatttaagttactggatgaacttcaggttacagacataaagaaagaacatataatt
catcatttgttggagggtctacttgctcagttttccggtgagctgtcatcattaaatatg
aagattgccacaattttggcagccctctacttcatgctgctcagatcctggataggaagc
atttccaaaccagtggccatcttggtgtctcttcgtggtgcagctgaactcacaaactcc
gtcagtgaaacgctgattccctcagtacaaatcgggctcataggggccctgaatctctta
ctgcaaagggccagaggggagttatcttcttccgccaagataccaccaccaacagtggcc
actcttttgccagtggtttgtcctatgctgccacatagcacacgacagttgccatcccct
gctgagcttgcaaagactagacatgatgaagagacgactggcaagggcaggtctgataac
ctggcagagtcaaagctgatgctacaggtaaccttgtgcagccttttaacagagataatt
gaggctacagacccccagctgtggctaccatctcttcagaaacactgtgtgctggcagct
ttgcttgtttctttggaagactacatgaaggctaaacagagcatgccctacatccactca
ggtttactgctattgacagcaattgcagaaaaagaaaagggtgctgcagtgctaacaatg
agtgatttcacagcccacacttgcctggcagttggcagtctgtacagcaaagaggaaatg
tttgctacacatgtcctgtcatccaaggcttctgcaggaacatccggaagcagcataagc
tggtatggtctctactgcatgtcagtcaatctgtacacactgctcctacacaagcttggc
ttttccttcctggatgatgctcttaatttccttggagcacaccaggacagaatgcagcag
tctctagacctggctcagcagaccctgctggaaccagcaatgatagaagctgaatgcaca
tgcctgttccttcaccaaatggcactgtatcgacgacagtggcgactccatcttccccaa
gttatggcaaagctgctgatgtcgctgctgaacatgcttcagacctttatctcactcctc
atccgacctcgttatctgcaacatctactagagcatgggaaagatggggacaaaggaaga
taccctcttcagtcatcacctttgcttcatcatcagacgtcaacagaagatatagaacaa
ccgagtgcacagcttctacaaactgaaaacagcatgatgaagattctgggcaagagcttt
gcagtattaaggcattttactcctgatttgtgtttggcacttctcgatcagagcatggac
atgtgtgaatttgagccactggtagacttggggttcagtactccatcagttgaccaccag
tcaccactgacatttgggtccttgatttcctgtgtctccgcttgtctccggcaactcagt
aaggttgatgctaagctgcattcacctcacaaagtgctgtcccctcatcgtcgcttgagt
agaactgtgtccgtgtcggagactcagacacagacatccaggagcctgttactgtttatt
atggagaactgcctgaccctgaccttgtctcaagcctgccgcaacctgcgggaaccagcc
ttgccacagagagagaagcagtttctcaagagagagctgagtacagaactgaattccttc
ctggtcagccttgcacgtcatctgcgacgaggaactcctggctcaccgggtgacaagtct
gtttttaacagccctcatgcgggcagcgtcagcacactaaacacttcatcagcaaccaat
gtttctgctcagcagtctttgagccggtcccagtctcagacctgcttctcctctagcaac
gaccagcagttcttccgactggtacaagagtttgttaaaaaggtgttgaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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