KEGG   Pseudoalteromonas carrageenovora: PC2016_1892
Entry
PC2016_1892       CDS       T06565                                 
Name
(GenBank) Pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pcar  Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcar03009]
    PC2016_1892
Enzymes [BR:pcar01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     PC2016_1892
Ribosome biogenesis [BR:pcar03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PC2016_1892
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: QBJ72096
Position
I:complement(2149422..2150381)
AA seq 319 aa
MSEKTGLQVSFVTINEDHLGQRIDNFLITHLKGVPKSAVYKILRKGEVRVNKKRIKPVYK
LQLDDVVRIPPIRVSEREEFVPSKLDKVTRLEDDILFEDKYLIVINKPSGMAVHGGSGLS
YGLIEALRALRPDERSLELVHRLDRDTSGCLLIAKRRSVLTALHEQLREKTMEKNYWALV
EGQWDSKTKNVTEGLRKNTLKSGERVVRVNNVEGKPSHTRFKVLERFNDCSLVQASPVTG
RTHQIRVHTQCKGHPIACDDKYGDQGFDESMRKVGLNRLFLHAHDLSFYHPKNETTMRIE
APLDKTLKNTLLKLRDAKQ
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtcagaaaaaaccggcttacaagtatcttttgtcacaatcaacgaagaccatttaggt
caacgaattgataactttcttattacccatttaaaaggggtgcctaaaagcgcagtttat
aaaattcttcgtaaaggtgaggtacgtgtaaacaaaaaacgtattaaacctgtttataag
ttacaactagacgatgtagtgcgtataccacctattagagtgtctgagcgagaagagttt
gtaccatcaaaactagataaagttactcgccttgaggacgatattttatttgaagataaa
taccttattgtgatcaacaaaccttcgggcatggctgtgcatggtggcagtggtttaagt
tatggcttaatagaagcgttacgcgcacttcgccctgatgagcgtagtctagagcttgta
cacaggctagaccgtgatacatcaggttgtttactaattgctaaacgccgttctgtatta
actgcattacatgagcagctacgcgaaaaaacaatggaaaaaaactactgggcgcttgta
gaaggtcagtgggattctaaaacgaaaaacgtgacagagggtttgcgtaaaaatacgctt
aaatcgggcgagcgagtagtgcgagtaaataatgttgagggtaaaccttcgcatactcgc
tttaaagtgcttgagcgttttaacgattgctcacttgtacaggcatcgccagttacaggt
agaacgcatcaaattcgtgtgcatactcaatgtaaaggtcaccctatagcgtgtgatgat
aagtatggcgaccaagggtttgacgaatctatgcgtaaagttggcttaaatcgtttattt
ttacacgcacacgatttaagtttttaccaccctaaaaacgaaactaccatgcgtatagaa
gccccactggataaaacacttaaaaatacgttattaaaattacgagatgcaaaacagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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