KEGG   Pseudoalteromonas carrageenovora: PC2016_2422
Entry
PC2016_2422       CDS       T06565                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pcar  Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcar03019]
    PC2016_2422
   03009 Ribosome biogenesis [BR:pcar03009]
    PC2016_2422
   03036 Chromosome and associated proteins [BR:pcar03036]
    PC2016_2422
Enzymes [BR:pcar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PC2016_2422
Messenger RNA biogenesis [BR:pcar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PC2016_2422
Ribosome biogenesis [BR:pcar03009]
 Eukaryotic type
  90S particles
   RNase
    PC2016_2422
 Prokaryotic type
  rRNA processing factors
   PC2016_2422
Chromosome and associated proteins [BR:pcar03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PC2016_2422
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: QBJ72613
Position
I:complement(2775333..2776010)
AA seq 225 aa
MKKNVTELYNRIGYVFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFP
KAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGELKSGGFRRESTLADAVEAIIG
AVFLDSDIERCGELILAWYESRLDAISPGLNQKDPKTLLQEYLQARKLSLPGYTVVDTKG
QAHNQTFTVECIVDGMDSIISVGSSRRKAEQKAAEKALKILKNEP
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaaaaaaaatgtaacagaattatataatagaattggctatgtatttgctgatcaaggt
ttacttgaacaagcaatgacgcaccgcagccacaaaggtcaacataatgagcgactagag
tttttaggcgactcaatattaagctttgtaattgccaatgcgctttatgctaaatttcca
aaagcacgcgaaggcgatttaagccgtatgcgttctacgcttgtgcgtggccaaactctt
gctgaatttggtctcgaatttggcctaggcgattacttgcgcttggggccgggtgagctt
aaaagtggaggtttccgccgtgagtctacacttgctgatgcagttgaagccattattggc
gcagtatttttagattcagatattgaacgctgcggagaactaattttagcgtggtacgag
tctcgacttgatgctatttcaccagggcttaatcaaaaagatccgaagaccctgctgcaa
gagtatctacaagcccgtaaattatctttaccgggttacactgttgttgacactaaaggc
caagcacataatcaaacattcacggttgaatgtattgttgatggaatggatagcataatt
tctgttggtagctcgcgccgtaaagccgaacaaaaagctgccgaaaaagcattgaagata
cttaaaaatgaaccttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system