KEGG   Persicimonas caeni: FRD00_13520
Entry
FRD00_13520       CDS       T06769                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pcay  Persicimonas caeni
Pathway
pcay03030  DNA replication
pcay03430  Mismatch repair
pcay03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FRD00_13520 (dnaX)
   03430 Mismatch repair
    FRD00_13520 (dnaX)
   03440 Homologous recombination
    FRD00_13520 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcay03032]
    FRD00_13520 (dnaX)
   03400 DNA repair and recombination proteins [BR:pcay03400]
    FRD00_13520 (dnaX)
Enzymes [BR:pcay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FRD00_13520 (dnaX)
DNA replication proteins [BR:pcay03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FRD00_13520 (dnaX)
DNA repair and recombination proteins [BR:pcay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FRD00_13520 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N AAA_5 AAA_2 AAA_14 AAA_18 AAA_30 DUF3646 TsaE AAA_19 AAA_24 nSTAND3 AAA_assoc_2 SRP54 RNA_helicase Rad17 AAA_16 Mg_chelatase DNA_pol3_delta_C Glyco_tranf_2_5 PIF1
Other DBs
NCBI-ProteinID: QED32951
Position
3640044..3642122
AA seq 692 aa
MSYVVLARKWRPKYFEEVVGQEHVARTLKNSLEQDRVAHAYLFCGTRGVGKTTTARILAK
ALNCEKGPTPTPCYECSSCKEIHEGQSVDVFEIDGASNRGINEIRELREGVRYAPSRDRY
KIYIIDEVHMLTNEAFNALLKTLEEPPEHAHFIFATTEPQKIPVTILSRCQRFDFKRISQ
HDIVDHLTHLCEAEEIDSEKAALQLIARQANGGMRDALSLMDQVISFAGDSFDEAQVAQI
LGVANRKHLFELSEAIISRNAEAALEVLDEVNRYGYDLQQFASELVTHFRDLVVTAVVEN
PDRVTNLTESELGIAREQVDGTPTDLLHRYFSVMADGAQEMTRSPYPKLLFEMTLVRMSS
LEPLVGLDLLVDRLQSLEGTLEDDVDMDAVAAADAQQAHQAKKKIPRRNEVEKTPAETAN
DGGESIKPEPVTKPEPVTATEPDPEPGTRHPEPGTRHPETGDRHPEPGDRHPEPGTRHPE
TGARHPEPGTRHPEPGTRHPEPGTRKPETVTKPEPVTKPEPVTEPEPVAEPEPVAEPKPS
TDTNERDALLAEPPRERWRALVEHIRKDTQPVAATCEHARLHQFDDGKVVIEIKPNYIEL
FREGDRPERVADAIKDALADLFSGEWSLEIKLPELDEPVSPEELTLYEEREADRVARKQQ
LEEDLKHHPTVEAARELFNPEKERVAVELHDE
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgtcctacgtagtcctcgccagaaagtggcgcccaaaatacttcgaagaagtcgtcggc
caggagcatgtggcgcgcacgctcaagaactctctcgagcaagaccgcgtggcgcatgct
tacctgttctgcggcacgcgcggcgtcggcaagacgaccacggcgcgtatcctcgcgaag
gcgctcaactgcgagaaggggcccacgccgacgccgtgctacgaatgctcgtcgtgcaaa
gagatccacgagggccagtcggtcgacgtcttcgagatcgacggtgcgtcgaaccgtggc
atcaacgagatccgcgagcttcgcgagggtgtgcgctatgcgcccagccgcgaccgctac
aagatctacatcatcgacgaagtccacatgctcaccaacgaggccttcaacgccctgttg
aagaccctcgaggagccgcccgagcacgcgcacttcatcttcgcgaccaccgagccgcag
aagatcccggtgaccatcctgagccggtgccagcgcttcgacttcaaacgcatcagccag
cacgacatcgtcgatcacctcacccacctgtgtgaggccgaggagatcgactcggagaag
gccgccctgcagctcatcgcccgccaggccaacggcggcatgcgcgacgcgctgagcctg
atggaccaggtcatcagcttcgccggcgactcgttcgacgaggcgcaggtcgcccagatc
ttgggcgtggccaaccgcaagcacctcttcgagctgagcgaggcgatcatctcgcgcaac
gccgaggccgcgctcgaggtcctcgacgaggtcaaccgctacggctacgacctgcagcaa
ttcgccagcgaattggtcacccactttcgcgacctggtggtcaccgccgtggtcgagaac
cccgaccgggtcaccaacctgaccgaaagcgagctgggcatcgcccgagagcaggtcgac
ggcacgcccaccgacctgttgcaccgttacttctcggtcatggccgacggcgcccaggag
atgacgcgctcgccgtacccgaagctgctgttcgagatgacgctggtgcgtatgtcgagc
ctcgagccgctcgtcggcctcgacctgctcgtcgaccggctgcagtcgctcgaggggacg
ctcgaggacgacgtcgacatggacgcggtggcggcggccgacgcgcagcaggcccaccaa
gccaaaaaaaaaattccgcggcggaatgaagtagagaagacgccggcggaaaccgccaat
gatggtggtgagtcgataaagccggagccggtcacgaagccggagccggtcacggccacg
gagccggatccggagcccggcacccggcacccggagcccggcacccggcacccggagacc
ggagaccggcacccggagcccggagaccggcacccggaacccggcacccggcacccggag
accggagctcggcacccggagcccggcacccggcacccggagcccggcacccggcacccg
gagcccggcacccggaaaccggaaacggtcacgaagccggagccggtcacgaagccggag
ccggtcacggagccggagccggtcgcggagccggagccggtcgcggagccgaagccttcc
acggacaccaacgagcgcgacgcgctcctcgccgagccgccccgtgagcgttggcgcgcg
ctggtcgagcatattcgcaaggatacgcagccggtggccgccacctgcgagcacgcccga
ctccatcaattcgacgacggcaaggtcgtcatcgagatcaagcccaactacatcgagctg
ttccgtgagggcgatcgtcccgagcgcgtcgccgacgccatcaaagacgccctggccgac
ctgttcagcggtgagtggtccctcgagatcaagctgcccgagctcgacgagcccgtctct
cccgaagagctgacgctgtatgaggagcgcgaggccgaccgcgtcgcgcgcaagcagcag
ctcgaagaagatctcaagcatcacccgaccgtcgaagccgcgcgcgagctcttcaatccc
gagaaagagcgcgtggcggtggagttgcacgacgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (24)   
   Pfam (24)   
All databases (35)   

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