KEGG   Persicimonas caeni: FRD00_18145
Entry
FRD00_18145       CDS       T06769                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
pcay  Persicimonas caeni
Pathway
pcay03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FRD00_18145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcay03021]
    FRD00_18145
   03400 DNA repair and recombination proteins [BR:pcay03400]
    FRD00_18145
Enzymes [BR:pcay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FRD00_18145
Transcription machinery [BR:pcay03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FRD00_18145
DNA repair and recombination proteins [BR:pcay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FRD00_18145
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QED33810
Position
4918487..4918741
AA seq 84 aa
MARVTVEDCLEKVENRFALVMMATQRAREIRKGAPRIFPSGNKEPVHALREIAAGFVKFD
DRSKRKLSRVLSLPELGEEGEETV
NT seq 255 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgtcgaagattgcctggaaaaggtcgaaaaccgcttcgcgctggtg
atgatggcaacccagcgcgcccgcgaaatccgcaagggcgctccgcgcatcttcccgtcg
ggcaacaaagagccggtgcacgcgctccgcgagatcgccgctggtttcgtcaagttcgac
gaccgcagcaagcgcaagctttcgcgcgttctgtcgcttccggagctcggcgaagagggc
gaagagacggtttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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