KEGG   Persicimonas caeni: FRD00_28845
Entry
FRD00_28845       CDS       T06769                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pcay  Persicimonas caeni
Pathway
pcay00300  Lysine biosynthesis
pcay00470  D-Amino acid metabolism
pcay01100  Metabolic pathways
pcay01110  Biosynthesis of secondary metabolites
pcay01120  Microbial metabolism in diverse environments
pcay01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FRD00_28845 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FRD00_28845 (dapF)
Enzymes [BR:pcay01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     FRD00_28845 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase DUF2826
Other DBs
NCBI-ProteinID: QED36202
Position
complement(7753897..7754718)
AA seq 273 aa
MKSFPIFKYHGLGNDFVVVREADAPDVEAHVEALCDRNRGVGADGVLVLSEFEDAQARMV
IFNRDGSRPEMCGNGVRCVVRHLVQVEGFCADALTIVSDAGPRPCRVEEQGAGTWQVAVE
MGEAKLDAEPAHVDHDGFTAELVKVDMGNPHAVTFQAAPIETIDAIGELLNAAHPEFPEG
VNVEFVEQTGPQAIRVDVYERGVGRTQACGTGACAAAVAAIDAGLCHADAPVEVELPGGV
LRIELRDGVVWMTGPVEYVFCGEITDDWLTSQR
NT seq 822 nt   +upstreamnt  +downstreamnt
gtgaagtcctttccgatcttcaaataccacggtcttggcaacgactttgtcgtggtgcgc
gaagccgacgcccccgacgtcgaagcccatgtcgaggcgctgtgcgaccgcaaccgcggc
gtcggcgccgacggcgtgctcgtgctctccgagttcgaagacgctcaggcgcgcatggtc
atctttaaccgcgatggctcgcgccccgaaatgtgtggaaacggcgtgcgctgcgtggtg
cgccacctggtgcaagtcgaaggtttctgtgccgacgcgctcaccatcgtgtctgacgcc
gggccgcgcccgtgtcgcgtagaagagcagggcgcaggcacctggcaggtcgccgtcgaa
atgggcgaggccaagctcgatgccgagccggcacatgtcgaccacgacgggttcacagcc
gaattggtcaaggtcgacatgggaaacccgcacgcggtgacctttcaggcagcccccatc
gagaccatcgatgcgatcggcgagctactcaacgcagcacaccccgagtttcccgagggt
gtcaacgtcgagttcgtcgagcagaccggcccgcaggcgattcgcgtcgacgtctacgag
cgcggcgtggggcgcacccaggcatgcggcacaggcgcttgcgccgcggccgtggctgcc
atcgacgccggtctttgccacgccgacgcccccgtcgaggtcgaacttcccggcggcgtg
ttgcgcatcgagcttcgcgacggcgtcgtctggatgacgggaccggtcgagtacgtcttt
tgcggcgaaatcaccgacgactggctgacttcacaacgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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