KEGG   Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_001450
Entry
PCC21_001450      CDS       T02320                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PCC21_001450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcc03400]
    PCC21_001450
Enzymes [BR:pcc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PCC21_001450
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PCC21_001450
DNA repair and recombination proteins [BR:pcc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PCC21_001450
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AFR01548
UniProt: A0AA85ZHA6
Position
155952..156761
AA seq 269 aa
MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNP
ETCSVLAHLGPEPLEAEFSADYLYQISRGKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNENDAAVLVGVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTLIETAKHGQRSTFFCRRCQK
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaattacctgaggttgaaaccagtcgtcggggaatttcaccgtatcttgtcgat
cacaccatcctttatgctgaagtgaggaactcgcgcctgcgctggccggtatcggctgag
attctctctctgagcgatgaaccggtgctcagtgtgcgtcggcgggcaaaatatctgctg
attgagctgactcgcggctggattattgtgcatctcggcatgtctggcagcctgcgggtg
ttgccggaatatagtgagccggagaaacacgatcatgttgatttggtgatggacagcggt
aaggtgctgcgttacaccgatccccggcgttttggtgcctggctgtggacggataatcca
gaaacttgttctgtattggcgcacttgggccctgagccgttagaggcggaattctctgcc
gattatctttatcagatttcacgcggtaaaaagacggcaatcaaacaatggattatggat
aacaaagtcgtcgttggcgtaggcaatatttacgcgagcgaatcgctgtttgctgcgggt
atccatcctgacagagctgctggatcgctaaatgaaaatgacgcagccgtattggtgggc
gtgattaaacaggtgctacagctttcgattgagcaggggggcacaacactgcgtgacttt
ttgcaatcagacggcaaacccggttattttgcgcaggagctgcgagtctatggccgcaac
ggtgaaccttgtcggacatgcggaacattgatcgaaaccgcgaagcatgggcagcgcagc
acgtttttctgtcgtcgctgccagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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