KEGG   Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_026590
Entry
PCC21_026590      CDS       T02320                                 
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00260  Glycine, serine and threonine metabolism
pcc01100  Metabolic pathways
Module
pcc_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:pcc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PCC21_026590
Enzymes [BR:pcc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     PCC21_026590
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Lycopene_cycl NAD_binding_8 Pyr_redox_2 Thi4 HI0933_like
Other DBs
NCBI-ProteinID: AFR04062
UniProt: A0AA85ZJJ5
Position
complement(3001935..3003614)
AA seq 559 aa
MEYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRY
NWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDWSYLD
CLPYFRKAETRDVGSNDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLNGYQ
QEGFGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFDGKRAVGVAYFKG
ESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDIPVVHDLPGVGENLQDHLEM
YLQYACKEPVSLYPALQWFNQPKIGAEWLFNGTGVGASNQFEAGGFIRSRDEFAWPNIQY
HFLPVAINYNGSNAVKEHGFQAHVGSMRSLSRGRVQVRSKDAREHPSILFNYMSTEQDWQ
EFRDAIRITREIMAQPALDKYRGREISPGLEVQTDEELDEFIRTHAETAFHPSCSCKMGE
DEMAVVDGQGRVHGMEGLRVVDASIMPQIITGNLNATTIMIAEKIADRIRRRQPLPRSKA
RYYVSGNTPVRKAPLKSVS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggaatatgattacatcattatcggagccggttcggcaggaaacgtgctggcaacgcgt
ctcacagaagaaagcgacgtaagcgttctgctgctcgaagcgggcggcccggactatcgt
ttggattttcgcacgcaaatgcccgccgcattggctttcccattgcaggggaagcgctat
aactgggcttatgaaaccgacccagaacctcacatgaataatcgccgtatggaatgtggt
cgcggcaaagggctgggtggttcctcgctgattaacggtatgtgctacatccgtggcaat
gcgatggattttgataactgggcgaccatgccgggtctggaagactggagttaccttgac
tgcctgccgtatttccgtaaagcagaaacgcgagacgtggggtcgaatgactaccatggc
gcgagcggtcctgtttcagtgacgacgccgaagatgggaaacaacgaactgtttcacgcg
atggttgaagcgggcgtacaggccggatatccgcgtacggacgatcttaacggctatcag
caggaaggttttggtccgatggatagaaccgtcacgccgaaggggcgtcgagccagtacc
gcgagaggctatttggatcaggcaaaaggccgtaaaaatctgaccatcgtgacgcatgcc
ttaactgacaagattctctttgacggaaaacgtgccgttggcgtggcttactttaaaggg
gaaagtgcgcagacggcgaaggcacgccgcgaggtgctgctgtgtgcgggcgcaatcgcc
tcgccgcaaatcttgcaacgttctggcgtggggccgaaagacttgctccagcgtctcgat
attcccgtggtacacgatttgcccggcgtcggcgagaatctgcaggaccatctggaaatg
tatttgcaatatgcctgcaaagaaccggtatcgctgtatccagcgctgcagtggtttaac
cagcctaaaatcggcgcggaatggttgttcaatggcactggtgttggggctagcaaccag
ttcgaagcgggtggctttattcgcagtcgggatgagttcgcctggccgaatattcaatac
cacttcttgcccgtcgccattaattacaacggcagtaatgcggtgaaagagcacggattt
caggcgcacgtcggctccatgcgttcactcagccgggggcgtgtacaagtgcgatccaaa
gacgcccgcgagcaccctagcatcttgttcaactatatgtcgacggagcaggattggcag
gagtttcgcgatgcgatccgcattacgcgtgaaatcatggcgcagcccgcactggataaa
taccgtgggcgagagatcagccctgggctggaggttcagactgatgaggaactggacgag
tttatccgcactcatgctgagacagcattccacccctcctgttcttgtaagatgggagag
gatgagatggcggtggtcgatgggcaaggccgggttcacggtatggaagggctacgcgtg
gtggatgcttccatcatgccgcagattattaccggtaatctgaacgcgacaaccatcatg
attgccgagaaaattgccgaccgaatccgccgccgtcagccgcttccgcgcagcaaagcg
cgctactatgtttccggaaataccccagtgagaaaagcgccgctgaagtcggtttcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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