KEGG   Mixta calida: C2E16_00815
Entry
C2E16_00815       CDS       T05419                                 
Name
(GenBank) xylose operon transcription regulator XylR
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
pcd  Mixta calida
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcd03000]
    C2E16_00815
Transcription factors [BR:pcd03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    C2E16_00815
SSDB
Motif
Pfam: Peripla_BP_3 HTH_18 HTH_AraC Peripla_BP_4
Other DBs
NCBI-ProteinID: AUY23589
Position
complement(172194..173372)
AA seq 392 aa
MFEKRFRISLLFNANKVYDRQVVEGVGEYLQASQTDWDIFIEEDFRCRIDNIRECLGDGV
IADYDDKEIEALLKNVDVPIVGVGGSYHRPEDYPPVHYIATDNAALVESAFLHLKEKGIN
RFAFYGLPASCGKRWAQEREYAFRQRVAQERYQGVIYQGMETAPANWQHAQNRLADWLQT
LPPQTGIIAVTDARARHLLQVCEHLNIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGTR
QMGYQAAKLLHRLLDRQPLPLQRILVPPMKVIARRSTDYRSLHDPAVIQAMHYIRCNACK
GIKVEQVLDAVGMSRSNLEKRFKDETGETIHTMIHSEKLERARMLLVSSSMPINEISQMC
GYPSLQYFYSVFKKSYATTPKEYRQQSGEVMS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtttgagaaacgttttcgcatcagcctgctgtttaacgccaacaaagtctacgatcgc
caggtggtggagggcgttggcgaatatctacaggcgtcgcaaaccgattgggacatcttt
atcgaggaagattttcgctgccgtatcgacaacatccgtgaatgtctcggcgacggcgtc
atcgcagactatgacgataaagagatcgaggcgctgctaaaaaacgtagacgtgccgatt
gtcggcgtcggcggttcttaccatcggccggaggattatccgccggtccactatatcgcc
accgataacgccgcgctggtggagagcgccttcctgcaccttaaggaaaagggcattaac
cgcttcgccttttacggcctgcccgcctcctgtggcaagcgctgggcgcaggagcgtgaa
tacgcctttcgtcagcgggtggcgcaagaacgttatcagggggtgatttatcagggcatg
gagaccgcgccggccaactggcagcatgcgcagaaccggctcgccgactggctacagacg
ctgccgccgcagaccgggattatcgccgtaaccgacgcgcgcgcccgtcacctgttgcag
gtgtgcgagcatttaaatattccggtgccggagaagctgtgcgtgatcggcatcgataac
gaggagctgacgcgctacctgtcgcgcgtcgcgctttcgtcggtggcgcagggcacgcgc
cagatgggttatcaggcggccaagctgctgcatcgcctgctggaccgtcagccgctgccg
ctacagcgtattctggtgccgccgatgaaagtgatcgcccgccgctctactgattatcgt
tcgctgcacgatccggcggtgattcaggcgatgcactatatccgctgcaatgcctgtaaa
ggcatcaaggtggaacaggtgctggacgccgtcggcatgtcgcgctccaacctggaaaag
cgctttaaggatgaaaccggcgagaccatccataccatgattcacagcgaaaagctggag
cgcgcgcgcatgctgctggtctcctcttccatgccgattaatgagatttcgcagatgtgc
ggctacccttcgctgcaatatttttattccgtgtttaagaaaagctacgccaccacgccg
aaggagtatcgccagcagagcggcgaggtgatgagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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