KEGG   Mixta calida: C2E16_03590
Entry
C2E16_03590       CDS       T05419                                 
Name
(GenBank) type VI secretion system protein TssL
  KO
K11892  type VI secretion system protein ImpK
Organism
pcd  Mixta calida
Pathway
pcd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C2E16_03590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcd02044]
    C2E16_03590
Secretion system [BR:pcd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C2E16_03590
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: AUY24083
Position
753295..754533
AA seq 412 aa
MQERHFTGSDAAFSGASSNNPLVAAANPLLNAIPQIRHSVTHDDPAALRQRLIDQVRHFE
KNSQRAGLPYEVIVGARYCLCTALDEAAALTPWGSRGVWPGNGLLVTFHNETWGGEKFFQ
LLAKLSQNPREHILLLELINYCLLLGFEGRYRVLDNGRSQLETIRQRLLQMIRGVRGGYP
PALSPHPEDQPVMRKMWRPVVPLWACAALVGFLACLLYIILNWRLGDVTSPVLASVYQTP
LPEVTIRNPAPRAPAVLNLRASLRPEIEQGLVAVRDEADQSVVTLKGDGLFASGSTAVRG
RYEAVIDRIAQAMDNVSGKILVTGYSDNVPIRSARFASNYELSLARAQSVQEMLQKHLSQ
PGRTKAEGRGETNPLVPNTTPENRARNRRVEITLLVSPENTRAELNGLQQGN
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgcaggaacgacattttaccggcagcgatgccgccttttccggcgccagcagcaataac
ccgctggttgccgccgctaatcctttgcttaacgcgatcccgcagatccgtcactccgtt
acgcatgacgatccggccgcgctgcgtcagcgcctgatcgatcaggtgcgccactttgag
aaaaacagccagcgcgccggtcttccttacgaggtgatcgtcggcgcgcgctactgtctt
tgcaccgcgctggacgaggcggcggcgctgacgccgtggggaagccggggcgtctggccc
ggcaatggcctgctggtgacgtttcataacgaaacctggggcggcgagaagttttttcag
ctgctggcgaagctgtcgcagaatccgcgcgaacatatcttgctgctggagctgatcaac
tactgtctgctgctgggtttcgaagggcgctaccgcgtgctggataatggccgctcgcag
ctggaaaccatccgtcagcggctgctgcaaatgatccgcggcgtgcgcggcggctacccg
ccggcgctgtcgcctcatcccgaagatcagccggtgatgcgtaaaatgtggcggccggtg
gtgccgctttgggcctgcgccgcccttgtcggcttcctcgcctgcctgctctatatcatt
ctcaactggcggctgggcgacgtgaccagtccggtgctggcctccgtttaccagacgccg
ctgccggaagtaactattcgcaacccggcgccgcgcgcgcctgcggtgctgaacctgcgc
gcttccctgcgccctgagatcgaacaggggctggtggcggtacgcgacgaggcggatcag
agcgtggtgacgctgaaaggggatggcctgttcgcctccggctccaccgcggtgcgcgga
cgctacgaggcggtgatcgaccgtatcgcgcaggcgatggataacgtcagcggcaaaatc
ctggtgaccggctacagcgataacgtgccgatccgcagcgcccgcttcgcctctaactat
gagctgtcgctggcgcgcgcgcagtcggtgcaggaaatgctgcaaaaacatctgtcgcaa
cccggacggacgaaggcggaaggccgtggcgaaaccaacccgctggttcccaacaccacg
cctgagaaccgcgcccgcaatcgtcgggtggagatcacactgttagtttcgccggaaaat
acgcgcgcggagctaaacggactgcagcaagggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system