KEGG   Mixta calida: C2E16_07560
Entry
C2E16_07560       CDS       T05419                                 
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
pcd  Mixta calida
Pathway
pcd02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C2E16_07560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcd02000]
    C2E16_07560
Enzymes [BR:pcd01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     C2E16_07560
Transporters [BR:pcd02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    C2E16_07560
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N DEAD Zeta_toxin AAA_22 AAA_16 DUF87 RsgA_GTPase AAA_25 AAA_30 AAA_29 nSTAND3 APS_kinase ABC_membrane_2 MMR_HSR1 AAA_18 AAA_5 RPW8 Activator-TraM
Other DBs
NCBI-ProteinID: AUY24777
Position
1605122..1606870
AA seq 582 aa
MHQDKDLSTWQTFRRLWPMIAPHKAGLIVAAVALIINAAGDTLMLSLLKPLLDEGFGKAD
KSVLIWMPLAVIGLMLVRGVTSYASSYCISWVSGNVVMNMRRRLFNHMMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSM
AIRTVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQDVEAKRFDKVSNRMRHQ
GMKLVSASSISDPVIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEVDNGTRVIERAKGDIEFRNVTFTYPGRDIPALR
DINLSIPAGKTVALVGRSGSGKSTMASLLTRFYDIQQGEILIDGHDLREYTLRSLRNQVA
LVSQNVHLFNDTIANNIAYARNDVYDRAQIEKAAEMAHAMDFIRKMENGLDTVIGENGVL
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGRIIERGTHDELIGQRGAYAQLHKMQFGQ
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgcatcaagataaagatctctcaacatggcagacttttcgtcgcctttggccgatgatc
gcaccacataaggcgggattaattgtggcggccgtagcgctgatcatcaacgcggcaggc
gacacccttatgctgtcattgctgaaacctttactggatgaggggtttgggaaagccgat
aagtcggtattaatatggatgccgctggccgtaattggcctgatgctggttcgcggagtg
accagctatgcatcaagttactgtatttcttgggtatctggcaatgttgtgatgaatatg
cgtcgccggttattcaaccatatgatgggcatgccggtctcctttttcgatcagcagtcc
accgggacgctgttgtcgcgcattacctacgattctgaacaggtcgcctcttcttcttcc
agcgcgctggttaccgtggtgcgtgaaggggcatcgattatcggcctgttcatcatgatg
ttttactatagctggcagctttcgctaatcctgattgtcctggcgccgattgtctctatg
gcgattcgtaccgtctctaaacgtttccgcagcatcagtaaaaacatgcagaatacgatg
ggccaggtgacgaccagcgcggaacagatgctgaaagggcacaaagaggtactgattttc
ggcggtcaggatgtagaagcgaaacgcttcgacaaggtcagcaaccgtatgcgtcatcag
ggaatgaagctggtctccgcttcttccatctccgatcctgttattcagttgatcgcttct
ctggcgctggctttcgtactttatgccgccagcttccccagcgtaatggataccctgacc
gccggcaccatcaccgtcgtcttttcctcgatgatcgcgctgatgcgtccgctgaaatct
ttaaccaacgttaacgcccagttccagcgcggtatggccgcctgtcaaacgctgttttcc
atcctcgatagcgaacaggaagtggataacggcacgcgtgtcattgaacgcgctaagggc
gatattgagttccgtaatgtgaccttcacctatcctggacgcgatattccggcgctgcgc
gatatcaacctttccatcccggcaggtaaaaccgtggcgctggttgggcgctccggctcc
ggcaaatcgacgatggccagtttgttgacgcgcttttatgatattcagcaaggcgaaatt
ctgattgatggccacgatttgcgcgagtataccctgcgctcgttgcgcaatcaggtcgcg
ctggtttctcagaacgtgcatctgtttaacgacaccatcgccaacaatatcgcctacgcg
cgcaacgatgtttatgaccgcgcgcagattgaaaaagccgctgaaatggcccatgcgatg
gacttcatccgcaagatggaaaacggcctggataccgtgatcggcgagaacggcgtgctg
ctttccggcggtcagcgtcagcgtatcgcgatcgcccgtgcgctgctgcgcgacagcccg
attctgattctggacgaggcgacctcggcactggataccgaatccgaacgcgcgattcag
tctgcgctggatgaactgcaaaaaaaccgcacctcattggtcattgcgcatcgtctgtcg
actatcgaaaaagcagatgaaatcgtggtggtggaagatggccgcattatcgagcgaggc
acgcatgatgagctgatcggccagcggggcgcttacgctcagctgcataaaatgcagttt
gggcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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