KEGG   Mixta calida: C2E16_12105
Entry
C2E16_12105       CDS       T05419                                 
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
  KO
K18146  multidrug efflux pump
Organism
pcd  Mixta calida
Pathway
pcd01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    C2E16_12105
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcd02000]
    C2E16_12105
   01504 Antimicrobial resistance genes [BR:pcd01504]
    C2E16_12105
Transporters [BR:pcd02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   C2E16_12105
Antimicrobial resistance genes [BR:pcd01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AdeABC [MD:M00649]
    C2E16_12105
SSDB
Motif
Pfam: ACR_tran MMPL
Other DBs
NCBI-ProteinID: AUY25579
Position
2534306..2537416
AA seq 1036 aa
MPQFFIERPVFAWVIALFIVLAGVIAIPQLPVAQYPSVAPPSVSITVTYPGATPETMNDS
VISLIEREISGVDGILYFGSSSDTSGTASITVTFKPGTDIKLAQVDVQNKIKVVESRLPQ
TVRQNGLEVEAANSGFLMIVGLRSPTAQYTEQDLSDYFARNVSEELKRVPGVGKVQLFGA
EKAMRVWLDPIKLFNYKLSVSDVTAALSQQNAQVSPGRIGDEPTQPGQRVTYPLTVRGQL
SSVEDFRNITLKALNNGSRVRLADVARVEQGLQSYAFAIRENGHAATAAAIQLVPGANAV
STAQGVRSRLNELSAVLPQGMSFSVPFDTAPFVKLSIEKVIHTFIEAMVLVFLVMLLFLQ
NLRYTFIPAIVAPVALLGTFTVMLIGGSSINVLTMFGMVLAIGIIVDDAIVVVESVERLM
AEKGLSPKEATREAMREITPAIIGITLVLTAVFIPMGFAAGSVGIIYRQFTISMAVSILF
SAFLALTMTPALCASLLKPIEQHGEKKKGFAGWFNRRFSALTNRYERGLHATLRRSGRVM
LIYAVLCAVMFMAYSALPSSFLPDEDQGYFMTSVQLPSDATQERTRHVVDRLEKAIMARP
GIDNNISIFGFGFSGSGSNTAMTFTTLKDWGERQGATADGEAERVQREMSNDPAAIVMSL
MPPAISDMGTSSGFELYLEDRAGYGYTALLQAASTLTEKANNSSAVNDVYIEGLPAGVSA
SIEVDREKAQAMGVSFDEINQMLSASIGSNYINDYVDNGRVQQVIVQADSAYRMQLADLL
KLYVRNVSGEMVPLSAFVTTNWIQSPQQLNRYQGYPAIKITGSTAAGYSSGAAMAEMDKL
AASLPTGYFVEWTGASLQERSSAAQMPLLIALSVLVVFLVLAALYESWSVPLSVILVVPL
GMAGALLAVFIAGMSNDVFFKVGMITLIGLSTKNAILIVEFARQLYAQGKPLLEATKEAA
RLRLRPIIMTSLAFTLGVVPLMLANGASKSTQNAIGTGVFGGMISGTLLAIFFVPVFFVI
ITSAVQRLSNSLKKVK
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgccgcaattctttatcgaaaggcctgtttttgcctgggttatagctctgtttatcgta
ctggcaggcgtcattgccattccgcagttgcctgtggcgcaatatccctcggtagccccg
ccgagcgtcagcatcacggtgacctaccccggcgccacgccagaaaccatgaatgattcg
gtaatctcactgatcgagagagaaatctccggcgttgacggcatactctactttgggtct
tcaagtgatacgtcaggcactgccagcatcacagttacctttaaacccggaacggacatc
aagctcgctcaggttgatgtgcagaacaaaattaaggtagttgaatcccggctaccgcaa
actgtacgtcagaatggtctggaggtggaggcggccaactctggctttttgatgatcgtc
gggctacgttcacccaccgctcagtacacggaacaggatctgagcgactactttgcgcgt
aacgtttcagaggagttgaagcgcgttccgggcgtcggcaaagttcagctgttcggcgct
gagaaagcgatgcgcgtgtggctggatccgattaaattgtttaactataaactctcggtc
agtgacgtcaccgcagcgctgagccagcagaatgcacaagtctcaccgggcagaattggc
gatgaaccgacgcagcccggacaacgcgtcacttatccgcttacggtgcgcgggcagctc
agttccgtggaagatttccgcaatattacgctgaaggcgttgaataatggttcgcgcgtt
cggctggctgatgtcgcgcgcgtggagcaaggtctgcaaagctatgcattcgctattcgc
gaaaacggacatgctgccaccgccgcggcgatccaattggtaccaggcgccaatgccgtc
agcaccgctcagggcgtgcgttcacggctgaacgaactttcagctgtgctgccgcagggt
atgtccttctcggtgccgtttgataccgcgccgtttgtgaagctgtcaattgaaaaggta
atacatacctttattgaagccatggtattggtattcctggtaatgttgctgttcctgcag
aatttgcgctacacctttattccggcaattgtcgcgccggtggcgctgctcggcacattt
actgtgatgctgatcggcggttcttccatcaatgtgctgacgatgtttggcatggtactg
gctatcggcatcattgttgacgatgcgattgtggtggtggagagcgtcgagcgcctgatg
gcggaaaaaggcctttcgccgaaagaggccacgcgagaagcaatgcgcgagatcacgccg
gcgatcatcggcatcacgctggtacttaccgccgtgtttattccgatgggattcgccgct
ggctcggttgggatcatctatcgtcagttcacgatttcaatggccgtttctattttattt
tcggctttccttgcgctgaccatgacacccgcgctgtgtgcttcgctgttgaagccgatt
gagcagcacggtgagaaaaagaaaggctttgcgggctggtttaaccgccgtttcagtgcc
ctgacgaaccgctatgagcgagggctgcatgccacgctgcggcgtagtggccgtgttatg
ctgatttatgccgtactgtgtgcggtaatgtttatggcctactctgcactgccttcatct
ttcctacccgacgaagaccagggctactttatgacatcggtccaactgccgtcagatgcc
acgcaggaaagaacacgtcatgtggtcgatcggcttgaaaaagcaatcatggcaagaccc
ggcattgacaataatatctccatttttggttttggtttttccggctccggttcgaacacc
gcgatgacctttaccacgctgaaagactggggcgagcggcagggcgcgactgctgacggg
gaagcagaacgagtgcagagggaaatgagtaacgaccccgccgccatagtgatgagcctg
atgccgcctgccatctccgatatggggacttcatcgggttttgaactctatcttgaagac
cgtgccggctacggctataccgcattattgcaggcagcctcgacgctgacggagaaagcc
aacaacagtagcgcggtcaatgacgtctacattgagggtttgcctgcgggcgtaagcgct
agtattgaggtcgacagggaaaaagcgcaggcgatgggcgttagctttgatgagattaat
caaatgctgtcagcctcgattggctcgaattacatcaatgactatgtggataacggacgt
gtacaacaggttattgtgcaggcggattccgcttaccgtatgcagctggcggatttgctc
aaactctacgtcaggaatgtgtcaggcgagatggttccgctgtcggcttttgttacgacg
aactggatccagtcgccgcagcagctcaatcgttatcagggctacccggcaattaaaatc
accggcagtaccgccgccggttactccagcggagcagcgatggctgaaatggacaagctt
gcggcttctcttccaacaggctatttcgtagagtggactggcgcttcgctacaggaacgc
agctcagcggctcagatgccgctgctgatagccttatccgttctcgttgtttttctggtg
cttgccgcgctgtatgagagctggtcagtaccgctttcagtgatacttgtcgttccgctg
ggcatggctggcgcgctgctggcggtatttatcgcaggtatgtccaacgatgtttttttc
aaggtcggtatgatcacgctaatcgggctttcgaccaaaaacgccatcttgattgtagag
tttgcccgacagctttatgcgcagggtaaaccgctgctcgaggcaacgaaggaagcggcc
cgattacgtctgcggccaatcatcatgacgtcattggcttttacgcttggcgtggttcca
ctgatgctggcgaacggtgccagtaagagtacccagaatgcgattggcacaggtgttttt
ggcggaatgatcagcggcacgctgttggcaatcttcttcgtgccggtattttttgtcatt
attacttccgctgttcaaaggcttagcaactcgctaaaaaaggttaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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