KEGG   Mixta calida: C2E16_19660
Entry
C2E16_19660       CDS       T05419                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pcd  Mixta calida
Pathway
pcd00300  Lysine biosynthesis
pcd00470  D-Amino acid metabolism
pcd01100  Metabolic pathways
pcd01110  Biosynthesis of secondary metabolites
pcd01120  Microbial metabolism in diverse environments
pcd01230  Biosynthesis of amino acids
Module
pcd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    C2E16_19660
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    C2E16_19660
Enzymes [BR:pcd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     C2E16_19660
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AUY27240
Position
complement(4140995..4141819)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKSDIRVSTQTGRMVLSVTNDELVRVNMGE
PNFEPQQVPFRANKAESLYLLRVAEQTIMFGVVSMGNPHCVIQVANVKTAAVETLGPVLE
SHERFPERVNVGFMEVVNSDHIRLRVYERGAGETQACGSGACAAVACGIQQGLLAEKVRV
DLPGGTLHIAWKGPGHPLYMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctcgaaaatgcacggtcttggcaatgactttatggtcgttgacgccgtcacg
caaaatgtctatttctcgccggagttgatccgtcgcctggcggatcgtcatctgggcatc
ggcttcgatcagctgttgatcgtcgagccgccttacgatcccgatctcgatttccattac
cgcatctttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcacgctgtttc
gcccgctttgtccgtctgaagggattgacgaacaaaagcgatatccgcgtcagcacccag
acggggcgcatggtactcagcgtcaccaacgatgagctggtgcgcgtcaacatgggcgag
ccaaatttcgaaccgcagcaggtgccgtttcgcgccaacaaggcggaaagcctttatctg
ctgcgcgtcgccgagcaaaccatcatgttcggcgtggtctccatgggcaatccgcattgc
gtgattcaggtcgccaacgtaaaaaccgcggcggtcgaaacgctgggcccggtgctggaa
agccatgaacgtttcccggagcgggttaacgtcggttttatggaagtggtgaattcggat
catatccgtctgcgcgtttatgaacgcggcgcaggcgaaacgcaggcctgcggcagcgga
gcgtgcgctgcggtggcctgcggcattcagcaagggctgttggcggaaaaagtgcgcgtc
gatctgccgggcggtacgctgcatatcgcatggaaagggccgggacatccgctctatatg
accggaccggccacgcacgtttatgatgggtttattcatttatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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