KEGG   Pseudomonas chlororaphis PA23: EY04_08145
Entry
EY04_08145        CDS       T03201                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch00020  Citrate cycle (TCA cycle)
pch00190  Oxidative phosphorylation
pch00650  Butanoate metabolism
pch01100  Metabolic pathways
pch01110  Biosynthesis of secondary metabolites
pch01120  Microbial metabolism in diverse environments
pch01200  Carbon metabolism
Module
pch_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pch_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pch_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:pch00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    EY04_08145 (sdhA)
   00650 Butanoate metabolism
    EY04_08145 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    EY04_08145 (sdhA)
Enzymes [BR:pch01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     EY04_08145 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA HI0933_like FAD_binding_3 Thi4 FAD_oxidored Pyr_redox_3
Other DBs
NCBI-ProteinID: AIC18868
UniProt: A0A7S5HM07
Position
1810748..1812520
AA seq 590 aa
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQEGAF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVPTNIHGQAITQNAEGVDEIIHGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYDDATDANIEAALARLNALNERTDGEDVATLRRELQNCMQNYFGVFRTGE
YMQKGIAQLAELRTRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGEKRVAKRAVNFSPKTVPTFEPKVRTY
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctaacattccaacgatttctttcgacgccatcatcattggtggcggcggcgccggc
atgcgtgccgcattgcagctggcccagggcggccacaagactgcagtgatcaccaaggtg
ttcccgacccgctcgcacactgtgtcggctcagggcggcatcacctgcgccatcgcgtcg
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactat
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgcggttttcgaa
ctggaccacatgggtctgccgttctcccgcaccgaaaccggtcgtatctaccagcgtcct
ttcggcggtcagtccaaggattacggtaaaggcggccaggctgcccgtacgtgcgcagct
tccgaccgtaccggtcacgcgctgctgcacaccctttatcagggcaacctgaaagccggc
accaccttcctgaacgagtactacgccgttgacctggtgaagaaccaggaaggcgcgttc
gtcggtgtgatcgcgatctgcatcgaaaccggcgaaaccacctacatccgcgcgaaagcc
accgtattggcgaccggcggtgcaggtcgtatctacgcctccaccaccaacgccctgatc
aacaccggtgacggtgtcggcatggcgctgcgtgccggcgtgccggtacaagacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtgaccgaaggttgc
cgtggtgaaggtggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgccaaggaccttgccggtcgtgacgttgttgcccgttcgatggttaaagagatc
atcgccggcaacggttgcggtccgaatggtgaccacgtgatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgtctgccaggcatctgcgaactgtccaagactttcgct
cacgttgacccggtggttgctccagtaccagtagttccaacttgccactatatgatgggc
ggcgtgccgaccaacattcatggccaggcaatcacccagaacgccgaaggcgtggatgag
atcatccatggtctgttcgctgtgggcgaagtggcttgtgtatcggttcacggtgccaac
cgcctgggtggcaactcgctgctcgacctggtggtattcggccgcgctgccggcctgcat
ctggaaaaagccttgaccgacggcatcgaatacgatgacgcgaccgacgccaacatcgag
gctgcactggcacgcctgaacgctctcaacgagcgtactgatggcgaagatgtggctacc
ctgcgtcgcgagctgcaaaactgcatgcagaactacttcggcgtattccgtaccggcgag
tacatgcagaagggcattgcccagctggccgagctgcgtacccgtatcgccaacgtcaag
atcaacgacaagtcgcaggcgttcaacactgcacgtatcgaagcactggaactgcagaac
ctgctggaagtggccgaagccaccgccatcgctgccgaagtgcgcaaagagtcccgcggc
gcccatgcccgtgaagacttcgaagaccgcgacgacgaaaactggctgtgccacaccctg
tacttcccgggtgagaagcgcgttgccaagcgtgccgttaacttctcgccgaagactgtt
ccgacttttgaaccaaaagtccggacttactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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