KEGG   Pseudomonas chlororaphis PA23: EY04_12070
Entry
EY04_12070        CDS       T03201                                 
Name
(GenBank) LuxR family transcriptional regulator
  KO
K18099  LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch02024  Quorum sensing
pch02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EY04_12070
   02025 Biofilm formation - Pseudomonas aeruginosa
    EY04_12070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pch03000]
    EY04_12070
Transcription factors [BR:pch03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    EY04_12070
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 HTH_20 HTH_38 HTH_28 HTH_23 Sigma70_r4 HTH_10 HTH_24 HTH_5
Other DBs
NCBI-ProteinID: AIC19608
Position
complement(2672391..2673116)
AA seq 241 aa
MEKRQDFMHWWNDLRMEILKQQESAQVFALLEREVRSLGFDFYAYGVRHSIPFTRPKIDI
YGSYPQAWIERYQQQNYAAIDPTILNGLRSTEMVVWSDALFGKGSVLWGEAREWGLRVGA
TLPIHTPDSALSVLSVARECTAISAVELGEIRLRLRCIIELATTRLGELGHPSSQVEQLE
LSAREREILQWTADGKSSGEIALILGISVNTVNFHLKVIQKKFGAANKTLAAAYAAVLGL
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagaaacgacaggatttcatgcactggtggaacgacctgcgcatggagatactcaag
caacaggagagcgcacaggtattcgcgctgctggaacgggaagtccggtccctggggttt
gatttctacgcttacggagtcaggcattcgatccccttcacccgcccgaaaatcgatatc
tatggctcctatccgcaagcctggatagagcgttaccagcaacagaactacgccgcgatc
gacccgacgatcctcaacggcctgcgctccacggaaatggtggtctggagcgacgccttg
ttcggcaaaggctcggtactgtggggtgaggcccgggaatggggtttgcgggtgggcgcc
accttgcccatccacacgcccgacagcgccctgagcgtgttgtcggtggcccgcgaatgc
acggcgatcagcgccgtggaactgggcgaaatccgcctgcgcctgcgctgcatcatcgaa
ctggcgaccacgcgcctcggcgaactcgggcaccccagcagccaggtcgaacagctggag
ctgagcgcgcgcgagcgggaaatcctgcaatggacggccgacggcaagagttccggggag
attgccctgatcctgggcatctcggtgaataccgtgaacttccacctcaaggtcatccag
aagaaattcggcgcagccaacaagactctggccgccgcctatgccgccgtcctggggctg
atctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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