KEGG   Pseudomonas chlororaphis PA23: EY04_26265
Entry
EY04_26265        CDS       T03201                                 
Name
(GenBank) transcriptional regulator
  KO
K18099  LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch02024  Quorum sensing
pch02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EY04_26265
   02025 Biofilm formation - Pseudomonas aeruginosa
    EY04_26265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pch03000]
    EY04_26265
Transcription factors [BR:pch03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    EY04_26265
SSDB
Motif
Pfam: Autoind_bind GerE HTH_10 HTH_23
Other DBs
NCBI-ProteinID: AIC22300
UniProt: H2DFH2
Position
complement(5772673..5773398)
AA seq 241 aa
MELGQQLGWDAYFYSIFARTMDMQEFTAVALRALRELRFDFFAYGMCSVTPFMRPRTYMY
GNYPEDWVQRYQAANYAVIDPTVKHSKVSSAPILWSNELFRGCADLWSEAKDSHLCHGLA
QPSFNAQGRVGVLSLARKNNPISLQEFEALKPVTRAFAAAAHEKISELESDVRVFNTGVA
FSGRECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYAVAMGY
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaattagggcagcagttgggatgggatgcgtacttttatagtatctttgcgcgaacc
atggatatgcaggagtttacggctgtcgcgttgagggccttgcgcgaactacggtttgat
ttttttgcctacggcatgtgcagcgtgaccccgttcatgcggcccaggacttatatgtac
ggcaattaccccgaggactgggtgcagcgatatcaggcggctaactacgcggtgatcgat
cccacggtgaagcacagcaaagtctcgtcggcccccattctatggagcaatgagttgttc
cggggatgcgcggacctgtggtctgaagccaaggattcacatttatgccacggcctggca
caaccctcgttcaacgcccaggggagggtcggggtgttaagcctggcgcgcaagaacaac
cccatcagccttcaggaatttgaagccttgaagccggtgaccagagcctttgccgccgcg
gcccacgagaaaatttccgagctggagagcgacgtgcgtgtcttcaatacgggcgtggcg
ttcagtgggagggaatgtgatgtgctgcgctggacggccgacggcaagacctcggaggaa
atcggcgtgatcatgggggtgtgcaccgataccgtgaattaccatcaccgcaacatccag
cgcaaaatcggcgccagtaaccgcgtgcaggcagtgtcttacgcagtcgcgatgggctat
atctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system