KEGG   Pseudomonas cichorii: PCH70_13260
Entry
PCH70_13260       CDS       T03002                                 
Name
(GenBank) radical SAM domain-containing protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
pci  Pseudomonas cichorii
Pathway
pci00790  Folate biosynthesis
pci01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pci00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    PCH70_13260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pci03016]
    PCH70_13260
Enzymes [BR:pci01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     PCH70_13260
Transfer RNA biogenesis [BR:pci03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PCH70_13260
SSDB
Motif
Pfam: Radical_SAM Fer4_12
Other DBs
NCBI-ProteinID: AHF66479
Position
1473122..1473769
AA seq 215 aa
MQDTLRITEIFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGKILSLEDILEQ
VAAYRPRYVCVTGGEPLAQPNAIPLLERLCDAGYEVSLETSGALDISAVDSRVSRVVDLK
TPGSKEVARNRYENMELLTPNDQVKFVICSRDDYDWAVSKLIQYGLDKRAGEVLFSASHH
ELKGRDLADWIVADNLPVRLQMQLHKILWDDEPGR
NT seq 648 nt   +upstreamnt  +downstreamnt
atgcaagacacattacgtatcaccgaaatcttttactcgttgcagggtgaaactcgtacg
gctgggctacccaccgtattcgtgcgcctcacgggttgtccgctgcgctgccagtattgc
gacagtgcctatgcattcagcggcggaaagatcctgtcgctggaagacatccttgagcag
gtcgctgcctatcgtccgcgttatgtctgtgtaaccggtggtgaaccgcttgcccagccc
aatgccattcccttgctcgagcgcctgtgtgatgccggttacgaggtttcgctggaaacc
agtggtgccctggatatctcggctgtagacagtcgtgtcagtcgcgtcgtcgacctgaag
accccaggctccaaggaagttgctcgcaatcgctacgaaaacatggaattgctgacgccc
aacgatcaggtcaagtttgtgatctgttccagggacgactatgactgggctgtgtccaag
ctgattcagtacgggctggacaagcgcgctggtgaagtgctgttttctgccagccaccat
gagctgaaaggccgtgatctggccgactggatcgtggcagacaacctgccggtccgcttg
cagatgcagttgcataaaattctttgggacgacgagccggggcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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