KEGG T03002: PCH70

Pseudomonas cichorii: PCH70_15010

Entry

PCH70_15010       CDS       T03002

Name

(GenBank) exonuclease SbcC

K03546

DNA repair protein SbcC/Rad50

Organism

pci Pseudomonas cichorii

Brite

KEGG Orthology (KO) [BR:pci00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pci03400]
    PCH70_15010
DNA repair and recombination proteins [BR:pci03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PCH70_15010
    Archaeal homologous recombinant proteins
     PCH70_15010

SSDB

Motif

Pfam:

AAA_23 SbcC_Walker_B AAA_29 AAA_21 SMC_N MMR_HSR1 AAA_22 nSTAND3

Other DBs

NCBI-ProteinID:

AHF66654

Position

complement(1664909..1668553)

AA seq 1214 aa
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDVEGEITTSDPRTLLRRGTGSGYAEVDFVGIDQRRYRARWETNRARDNAA
KKLQASRQTLTDLDNEQILSNQSKREFEQLIEQRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLNAQAGNITPLEPEQRAELEQNH
SEAQQQHKAHQARLRQLELKQQWLTELHRLSDEQLSANESLNSAQQDWDNQQGQRQTLGQ
LERLGPQRHRFARRIALDTQLTPLADRIRQHQAQETTLQAQQQQLESARSNAHANLLEAQ
QQQNDAKPRLQQAFASQNTLNHLTQELAKIVALQQQAEQSCAEGQSQLQGLLDQQQQVAE
RLERIARQLEHSTELAPLAHAWNAWRDRLKSLTLTANRLKHGQGELPALQARAADADQQW
LQQRNDLEVLYREADCEAEAVTEQTQILGSLLQDNRKQQRAFEELARLWASQQEIDKQLQ
ALGQQQQEAQQERDQLNAEGIRTRDELKVAEQTLSVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSVEHPWHQPEALLQSLTRHDETEQAGAQKAVDELKEKYNQLREQVGGVIAR
QKELIRQQERLALQQQELAPDLHAHPLGAQLLDRDAAQRDSWLKQQLSQLNEVINRDEQR
QDALLTLQKDAARLQQQVQAAHEASQTAARHVTDQIKQLEADRERLEEELTALATLVSTE
LLDKLRNDASATVMQLEQQVTQRLDQLEQQDEEQQEQRERQQRIEKEQAAQQNRVQRQTE
LAEQVQTLSQQQDASQQVLTELLGSHADAQQWQNALEQAVEQARHAETSAGQTLQDVHHQ
LIQLGAELKADQQQLQALEQESSELDGQIGEWRSSHQELDDAALENLLTYDDARIDQLRQ
QLNRSEKALEQAKVLLHEREQRLQQHQAQHSDITDNEQLAAALLQVQTECEISEQHCADL
RARLSEDEQRRNANSELQARIVQANGEYQRWARLAALIGSAEGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGD

NT seq 3645 nt +upstreamnt +downstreamnt
atgaagattctcgccattcgcctgaaaaacctcgcctcgctggccgggccgttcgagctg
gatttcaccgcagagcctctggccagtgccggtctgttcgcgatcaccggccctaccggc
gcgggcaagagcaccttgctcgatgccctgtgcctggcgctgttcggggcgattccgcgc
ctgagcaatatcggccagtccaaggtcccggatgtggaaggcgaaatcaccaccagcgac
ccgcgaacccttctgcgacgcggcacaggcagcggctacgccgaagtggattttgtcggc
atcgatcaacgtcgttaccgcgcccgctgggaaaccaaccgtgcacgggacaacgctgcg
aaaaagctgcaagccagccgccagacccttaccgatctggacaacgagcaaatcctcagc
aaccagagcaaacgcgagttcgagcaactgatcgaacagcgcctggggctcaacttcgag
cagttcacccgtgccgtgatgctggcacagagcgagttcagtgccttcctcaaggccgat
gacaaggaacgcagcgagctgctggaaaagctgaccaacaccgccatctacagccagctc
ggacgccgcgcctacagcaagagcaaggaagccgaagaagcgctcaagaccctcaacgcc
caggccggcaacatcaccccgcttgagcctgagcagcgcgctgaactcgaacagaaccac
agcgaagcccagcaacagcacaaggcccatcaggcccgactgcgccaactggaactcaag
caacaatggctcaccgagctgcatcgcctaagcgatgaacagctcagcgccaacgaaagc
ctgaacagcgcgcaacaggattgggacaaccagcaaggccagcgccagacactcggccaa
ctggagcgtctggggccacaacgccatcgcttcgcccgccgcatcgccctcgatacccag
ctcacgccgctggccgatcgcattcgccagcatcaagcccaggaaaccacgctacaggct
caacagcagcaactggaaagcgcccgcagcaatgcgcacgccaacctgctcgaagcccag
cagcaacagaacgatgccaagccacggctgcaacaggcctttgcaagccagaacaccctg
aaccacctgactcaggaactggccaaaatcgtcgcgcttcagcaacaggctgaacagagt
tgcgcagagggccagagccagttgcaaggtttgctcgaccaacagcaacaggtcgctgag
cgtctggaacgtatcgcccggcaactggaacacagcaccgaactcgccccgctggcacac
gcctggaacgcctggcgcgaccggctgaaatccctgacgttgaccgccaatcgcctgaaa
cacgggcaaggcgagttgcctgctctgcaagcgcgtgccgccgatgccgatcagcaatgg
ctccagcagcgcaacgacctggaagtgttgtaccgcgaggcggattgcgaagcagaagcc
gtcaccgaacagacccagattctgggcagcctgttgcaggacaaccgcaagcagcagcgc
gcctttgaagaactggcccgcctgtgggccagccagcaggaaatcgacaagcaactgcaa
gccctcgggcaacagcagcaggaagcccagcaggaacgcgaccagctcaatgccgaaggc
atccgcacgcgagatgaactcaaggtggccgagcagaccctgagcgtcactcaacagcta
ctggaacgtcagcgtctggcccgcagcgccagcgtcgaagaactgcgcgaacagttgcag
gatgaccagccgtgcccggtgtgcggcagcgtcgaacatccctggcatcaacccgaagcg
ctgctgcaaagcctgactcgacacgatgaaaccgaacaggccggcgcccagaaagcggtg
gatgagttaaaggaaaagtacaaccagttgcgcgagcaggtgggcggcgtcattgcccgg
cagaaagaactcattcgccagcaggaaagactcgccctccagcagcaggaactcgcccct
gatctgcacgcccacccgcttggcgcacaactgctggaccgtgatgccgcacagcgcgac
agctggctgaagcagcagctcagccagctgaacgaagtcatcaaccgcgacgaacagcgc
caggatgcattgctcacgttgcaaaaagacgctgcgcgcctgcaacagcaagtccaggct
gcccatgaagccagccagaccgccgcacggcatgtcacggaccagatcaagcaactggaa
gcggatcgcgagcgcctggaagaagaactgacagcgcttgccacactggtatccaccgag
cttctggacaagctgcgcaacgacgcttcggccaccgtcatgcagcttgagcaacaagtg
acccagcgtctggaccagcttgaacagcaagacgaagagcagcaggaacagcgcgaacgc
cagcaaaggatcgagaaggaacaggctgcgcaacagaaccgggtccagcgccagactgaa
ctggctgaacaggttcaaaccctgagccagcagcaagacgccagccaacaggtgctgact
gaactgctgggctcccatgccgatgcccaacagtggcaaaacgcgctggaacaagccgtc
gagcaagcccgacacgctgaaacctcggcaggccagaccttgcaggatgttcaccaccaa
ctgattcagctcggtgccgaactcaaggccgatcaacagcagttgcaggccctggaacag
gagtccagcgaactcgatggccagatcggcgagtggcgcagcagccatcaggaactggat
gacgcagcacttgaaaacctgctgacttacgacgacgcacgcatcgatcaactgcgccag
caactgaaccgcagtgaaaaggctctggaacaagccaaagtactgctgcatgagcgcgag
cagcgcctgcaacagcatcaggcgcaacacagcgacatcaccgataacgagcaactggcc
gctgccctgcttcaggttcagaccgaatgtgaaatcagcgaacagcactgcgccgacctg
cgcgccaggctgagcgaagacgaacagcggcgtaacgccaacagcgagctgcaagcgcgc
atcgtgcaggccaacggcgagtatcaacgctgggcgcgtctggcggcgctgatcggttca
gcggaaggcgacaagttccgcaagatcgcccaggcctataacctcgacctgctggtccat
catgccaacgcccaactcaggcaactggtgcgccgttatcgcctcaagcgcggcggcagc
atgcttggcctgctggtgctggacacggaaatgggcgatgaactgcgctcggtgcattcg
ctgtcgggcggggaaaccttcctcgtctcgctggcgctggcattggggctggcctcgatg
gcgtcgagcaccttgcgtatcgaatcgttgttcatcgacgaaggcttcggcagcctggac
cccgaatccctgcaactggccatggacgccctggacggcctgcaggcacagggacgcaag
gttggcgtgatctctcacgtacaggaaatgcatgagcggattccggtacagatcaaggtc
cgtcgacaggggaacgggttgagcacgatagaggttggggattga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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