KEGG   Pseudomonas cichorii: PCH70_35950
Entry
PCH70_35950       CDS       T03002                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase A
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
pci  Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:pci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pci03009]
    PCH70_35950
   03016 Transfer RNA biogenesis [BR:pci03016]
    PCH70_35950
Enzymes [BR:pci01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     PCH70_35950
    5.4.99.29  23S rRNA pseudouridine746 synthase
     PCH70_35950
Ribosome biogenesis [BR:pci03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PCH70_35950
Transfer RNA biogenesis [BR:pci03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    PCH70_35950
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AHF68748
Position
4248230..4248865
AA seq 211 aa
MPLSNIRIIHQDAAVLVIDKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWET
SGIILLARDADTHRELSRQFHDRETEKAYTALCWGQPTLDSGSIDLPLRYDPPTKPRHVV
DHEAGKHALTFWKIVERYDTHCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHPEALA
AYPRLCLHASMLSFTHPVSGERLKFECAAPF
NT seq 636 nt   +upstreamnt  +downstreamnt
atgccgttgtcgaacatccgcatcatccaccaggacgccgccgttctggtcatcgataaa
cccacattactgctttcagtccctggtcgtgccgacgacaacaaggactgcctgattacc
cgcctgcaggaaaacggctaccccgaagcccgaatcgtgcaccgactggactgggaaacc
tccggcatcatcctgctcgcccgggatgccgatacccaccgcgagctgtctcgccagttc
catgaccgcgaaaccgagaaggcttacaccgccctgtgctggggtcagccaaccctggac
agcggcagcatcgacctgcccctgcgctacgacccgccgaccaagccccggcatgtggtg
gatcatgaagccgggaagcacgcgctgaccttctggaagatcgtggagcgctacgacact
cactgtcgcgtggaactcacgccgatcaccggtcgctcccatcagttgcgggtacacatg
ctgtccatcgggcatccgctgctgggtgatggtttgtacgcccatccagaggcgttagcg
gcctatccgcgcctgtgcctgcatgcaagcatgctgagcttcactcatccggtcagtggc
gagcggttgaaattcgagtgtgcggcgccgttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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