KEGG   Paraburkholderia caledonica: CUJ87_04845
Entry
CUJ87_04845       CDS       T05740                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pcj  Paraburkholderia caledonica
Pathway
pcj03030  DNA replication
pcj03430  Mismatch repair
pcj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CUJ87_04845
   03430 Mismatch repair
    CUJ87_04845
   03440 Homologous recombination
    CUJ87_04845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcj03032]
    CUJ87_04845
   03400 DNA repair and recombination proteins [BR:pcj03400]
    CUJ87_04845
Enzymes [BR:pcj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CUJ87_04845
DNA replication proteins [BR:pcj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CUJ87_04845
DNA repair and recombination proteins [BR:pcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CUJ87_04845
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon RecG_wedge
Other DBs
NCBI-ProteinID: AXF13816
UniProt: A0A2Z5MBC5
Position
PHRS4_A:1096012..1099602
AA seq 1196 aa
MSPMSDPRFVHLRVHSEFSIADGIVRLDDVVKAAAQDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVE
AGWLESGLGEGLLALSGAQQGDVGLALAAGNQEAAKRNALHWAKVFPGGFYIELQRCGQP
GGEQYVQQAVALAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRQKRFTP
EQYFRTQEEMAALFADIPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVHL
SKEGLEKRLEQLYPDEAERAAQRETYYQRLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGRLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKKDWSLGQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAQ
HRELFRQGAAKNGLTGEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLANKMTVLPPDINLSAYRFEPVAEVDGKRSKTIRYGLG
AIKGSGQNAIEEILRAREDGPFIDIFDFCNRIDRRVVNRRTVEALIRAGAFDTLHPNRAQ
LIASVSLAMEAAEQASANALQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKTEVRRFVRQKIGELKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNETFEANKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKV
QMNGNADALALRRVLEAHSAGKDEPQAVPAPAASSRGGNGGGRNGGGGFGGGYGGDNGRQ
RQPVQIPNGLAVQVVYRSENAEGEMRLGDAWRVKPTDELLADLRGQFAGSAIEIVY
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgtcgcccatgtcagatccccgcttcgttcatctccgcgtccactccgaattctcgatt
gccgacggcatcgtgcgtcttgacgacgtcgtcaaggcggctgcccaggacggtcagggc
gcgctcgcccttaccgatctcggcaacgcgttcggtctcgtccgtttctataaggaagcg
cgcggcaaaggggtcaaacccattgccggttgcgacgtctggattaccaatccggacgac
cgcgacaagccttcgcgcctgctgctgctggttaaagaccgtcgcggctacctgaacctg
tgcgagttgctgagcaaggcttccctcacgaaccagtatcgtggtcgcgcggaagtcgag
gctggctggctcgaatcgggcctgggcgagggcttgctcgcattgtcgggggcgcagcag
ggtgacgtcggactcgcgcttgccgcaggcaatcaggaagcggcaaagcgcaacgcgctg
cattgggcaaaggtctttccgggcggcttctacatcgagttgcagcgttgcggtcagccg
ggcggcgagcagtatgtccagcaggcggtcgcgctcgcagcttcgttaaagctgccggta
gtcgccacgcaccccatgcagttcatgacacccgacgacttcaccgcgcacgaagcgcgc
gtgtgcatttcggaaggcgacattctcgccaatccgcggcgccagaagcgcttcacgccc
gagcagtatttccgcacgcaagaggagatggccgcgctcttcgcggatattccgtcggcg
cttgccaatacggtggaaatcgccaagcgctgtaatctcacgctagagctgggcaagccg
aaactgccgctctttccgacgcccgacggtatgtcgctcgacgactacctcgtgcatctg
tcgaaagaagggctggaaaagcgtctcgagcagttgtacccggacgaagcggagcgcgcc
gcgcagcgtgagacgtattatcagcggctcgagttcgagtgcggcacgatcatcaagatg
ggctttcccggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaatggc
gtgcccgtgggccccggccgcggctcgggcgcgggctcgctcgtcgcctatgcgctcggc
gtgaccgacctcgatccgctgcgctataacctgctgttcgagcgtttcctgaacccggaa
cgcgtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatc
cagtacgtgaaggagaaatacggcgcagacgccgtgtcgcaaatcgcgacgttcggcacg
atggccgcgaaggcggcggtgcgcgatatcggccgcgtgctcgatctcggctacatgttc
acagacggcatcgcaaagcttattccgttcaagccgggcaagcacgtcacgattgccgac
gcgatgaaggaagagccgcttctgcaggagcgcttcgacaacgaagacgaagtacatcag
ctgctcgaactcgcgcaacgtgtggaaggcctcacgcgcaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgcccggcaggctgaccgatttctgcccgctctacacgcagggtgat
gaaagcggcgtcgtgagccagtacgacaaggacgacgtcgaagcggtcggcctcgtgaag
ttcgactttctgggtctcaccacactgaccattctggattgggccgagcgttatatccgc
cgtctcgatccgtcaaagaaagactggtcgctcgggcaagtgccgctcgacgaccctgcg
tcattctcgatcctgaagaaagcgaatacggttgccgtgttccagctggaaagccgcggc
atgcagggcatgctgaaagacgcgcagcctgaccgcttcgaggacatcatcgcgctcgtc
gcgttgtaccgtccgggcccaatggacttgatcccgagcttctgcgcgcgtaagcatggc
cgcgaagtggtcgagtatcctgacccgcgcgtcgaacctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctc
ggcggcgccgacttgctgcgtcgcgcgatgggtaagaagaaggccgaggaaatggcccag
catcgcgagttgttccgccagggcgccgcgaagaacgggctgaccggcgagaaggccgac
gaaatcttcgacttgatggagaagttcgcgggttacggcttcaacaagtcgcacgcggct
gcgtatgcgctcctcgcctattacaccgcgtggctgaaggcgcaccatccggcggaattc
atggcggcgaatatgtcgctcgccatggacgacacggacaaggtcaagatcctgttcgaa
gactgtctcgccaacaagatgaccgtgctgccgccggacatcaatctgtcggcgtatcgt
ttcgagccggtcgcggaagtcgacggcaagcgctcaaagaccatccgctatggcctcggc
gcgatcaagggcagcggccagaatgcgatcgaggaaatcctgcgcgcgcgcgaagacggt
ccgtttatcgacatcttcgatttttgcaaccggatcgaccgccgcgtcgtgaatcgccgc
acggttgaagcgctgattcgcgcaggcgcgttcgacaccttgcatccgaatcgcgcccag
ctgatcgcgtcggtttcgctcgccatggaagccgccgagcaggcgagcgcgaatgcgctg
caagcgggactgttcgacatgggcgacgcgccgtcgcagggccacgaactggtggacgaa
cccgagtggcccgaaaagaaaaagttgcaggaagagaaggccgcgctcggcttctacctg
tcggggcatctgttcgatgcgtacaagaccgaagtgcgccgcttcgtgcgccagaaaatc
ggcgagttgaaggaagggcgcgacaagctggtcgccggcatcatcgcgtcgcttcgcacg
cagatgacccagcgcggcaagatgctgattgcgctactcgatgacggcaccggtcaatgc
gaagtgacggtcttcaacgagaccttcgaagcgaacaagcaactgttcaaggaagacgag
ttgctggtcgtgcagggccaggcgcgcaacgacgcgttcacaggcggtatccgattcacg
gtcgacacggtcatggatctgggccgcgcgcgttgccgctatgccgaggccgtgaaagtg
cagatgaacggcaacgctgacgcattggcgttgcggcgcgtgctcgaggcacatagcgcg
ggtaaagatgagccgcaggcagtgccggcgccggcggcttcatcgcgcggcggcaatggc
ggtggacgaaacgggggcggcggatttggtggcggctacggcggcgacaatgggcggcaa
cgtcagcccgtccagatcccgaacggcctcgccgttcaggtggtataccgtagcgagaac
gcagagggcgaaatgcgtcttggcgacgcctggcgcgtgaagcccaccgacgaactgctt
gccgacctgcgcggccagttcgccggcagcgcgatcgagattgtgtattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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