KEGG   Paraburkholderia caledonica: CUJ87_15840
Entry
CUJ87_15840       CDS       T05740                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pcj  Paraburkholderia caledonica
Pathway
pcj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CUJ87_15840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcj03021]
    CUJ87_15840
   03400 DNA repair and recombination proteins [BR:pcj03400]
    CUJ87_15840
Enzymes [BR:pcj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CUJ87_15840
Transcription machinery [BR:pcj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CUJ87_15840
DNA repair and recombination proteins [BR:pcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CUJ87_15840
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: AXF15697
UniProt: A0A2Z5MGP3
Position
PHRS4_A:complement(3551931..3552908)
AA seq 325 aa
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEATAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcaaaccagtttgttgaagcccaagatcatcgcagttgaatcgctgggcgaaagccac
gcgaaagtggtcatggaaccgtttgaacgcggttacggccacaccttgggtaacgcgctc
cggcgcgtgctgttgtcgtcgatgatcggctacgcgccgaccgaagtgacgatcgcaggc
gtcgtacatgagtattcgacgctcgacggtgtgcaagaggacgtggtcaacctgttgttg
aacctgaagggcgtagtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgttgttaccgccggcgacatcgaactcgcgcatgattgcgaagtc
atcaaccctgatcacgtgattgcgcatctgtcgaagggcggcaagctcgacgtccagatc
aaggtcgagaagggccgcggttacgtgccgggcaatgtgcgtcgttacggcgaagagtcg
gccaagatcatcggccgtatcgtgctggatgcgtcgttctcgccggttcgccgcgtgagc
tacgccgtggaaagcgctcgcgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgaaaccaacggtgtgatctcgccggaagaagcgattcgtcaatcggctcgcattctg
gttgatcaactgtctgtgttcgctgcactggaaggcaccgaagcaacggctgaagcgccg
tcgcgcgcgccgcagatcgatccgatcctgctgcgtccggtcgatgatctcgaattgacg
gttcgttccgcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgagttgctcaagacgccgaatctgggccgcaagtcgctgaacgaaatc
aaggaagtactggcgtcgcgtggtttgacgctcggcatgaagctcgaaaattggccgccc
gctgggctggacaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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