KEGG   Pyrobaculum calidifontis: Pcal_1250
Entry
Pcal_1250         CDS       T00483                                 
Name
(GenBank) hypothetical protein
  KO
K03660  N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
Organism
pcl  Pyrobaculum calidifontis
Pathway
pcl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pcal_1250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcl03400]
    Pcal_1250
Enzymes [BR:pcl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pcal_1250
DNA repair and recombination proteins [BR:pcl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pcal_1250
SSDB
Motif
Pfam: DUF1150
Other DBs
NCBI-ProteinID: ABO08674
UniProt: A3MVK7
Position
1162772..1163668
AA seq 298 aa
MVYAVELEERFVIRVEKGDVDFHLTAAVYNFKWYYDGERLVLVEDRDAALVVEEEGTWLR
VTGYGEVEKGEAAELVAKRLGLGEDYSDFFRRAAGDPILREAPRIFAKWRLRSATPWYAF
LVAVLQQNASFLQGWRGLCCIIKRFGTPMRLGQMYTIAPPTPREVLDLGDKLRSCPIGYR
AATIAAVAETFAKGGDPFKARGVGPYTRSLVELLAHRRYDAAPVDRWVKRLVQEAVGQDA
EQYLREKFGQWAGLAVYLYTVALDAAPLRKALERLKKGQVTPMEEVSPMGMWKTEMCH
NT seq 897 nt   +upstreamnt  +downstreamnt
atggtttacgccgtggagcttgaggagagattcgtcatacgggtagagaagggcgacgtg
gacttccacttgacagccgccgtctacaacttcaaatggtactacgacggggagaggctt
gtcctcgtggaggacagagacgcggcgctcgtggtcgaggaggaggggacgtggctgaga
gtgacgggttatggggaggtggaaaagggtgaggcggcggagctcgtggccaagaggctc
ggcctgggcgaggactactccgacttcttccgccgggcggcgggggaccccattctcaga
gaggcgccgcggatatttgcaaagtggaggctcagatctgccacgccctggtacgccttc
ctagtcgcagtgctacagcaaaacgccagcttcctccagggctggagggggctctgctgt
ataataaagcggtttggcacgccgatgaggctggggcagatgtacaccatcgccccgccg
accccacgcgaggtcctcgacctgggagacaagctgaggagttgccccatcggataccgc
gccgccaccatagccgccgtggccgagacctttgcaaaaggcggagaccccttcaaggcg
agaggcgtagggccctacacgaggagcctcgtggagctactcgcccaccggagatacgac
gcagcccccgtagacaggtgggtcaagcggctcgtccaagaggccgtgggccaagacgca
gagcaatacctccgagagaagttcggccaatgggcaggcctcgcagtctacctctacacc
gtggccctagacgcggcccccctacggaaggccctcgaaaggctgaagaaaggccaagtg
acaccaatggaagaggtctcgccaatgggcatgtggaagacagagatgtgccactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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