KEGG   Pedobacter cryoconitis: AY601_2088
Entry
AY601_2088        CDS       T04341                                 
Name
(GenBank) Alpha-rhamnosidase
  KO
K05989  alpha-L-rhamnosidase [EC:3.2.1.40]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00946  Degradation of flavonoids
pcm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09110 Biosynthesis of other secondary metabolites
   00946 Degradation of flavonoids
    AY601_2088
Enzymes [BR:pcm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.40  alpha-L-rhamnosidase
     AY601_2088
SSDB
Motif
Pfam: Bac_rhamnosid6H Bac_rhamnosid_N Bac_rhamnosid Bac_rhamnosid_C
Other DBs
NCBI-ProteinID: AMP98989
UniProt: A0A127VCM4
Position
complement(2398115..2400832)
AA seq 905 aa
MKFYQKISISSSLFLIFGFSPLAFGSAKFIAGSFVAPFTPEIVSPGGLQCEHLVNPMGID
APKPRLSWLLSDTCQGARQTAYRVMVGTDSSALLQQKKIVWNTGKVNSSAALLLYNGDVL
KPFTKYFWQVEVWDKDGKPGTARIASFETGMVKMSNWKGTWISDRNEVNTLPAPYFRKVF
ESPKKIKSARAYIAAAGLYELYLNGKKVGNHRLDPMYTRFDRRNLYVSYDVTANLQAGKN
AIGVLLGNGWYNHQSLAVWNFDKAPWRARPAFCLDLRITYQDGSEETVTSDGSWKTHSGP
LVFNSIYTAEHYDARLEQPGWNKVDFDASKWGEVTLRAAPSKNIVSQAMHPIRSIETIPA
ISVKKFNDTTYVFDLGRNIAGVSKIKVKGQSGTVIQIKHGERLYPDGRLDLSNIDVYHRP
ADKKDPFQTDILILNGKGEEEFMARFNYKGFQYVEVVSSKPVTLTKESITGYFMHSDVPV
AGQISSSNPLIDKLWWATNNSYLSNLYGYPTDCPQREKNGWTGDGHFAVETGLYNFDGIT
VYEKWLADHRDEQQPNGVLPDIIPTGGWGYGTANGTDWTSTIAIIPWDIYQFYGDSKLLA
ACYDNIKSYVNYVTQISPSGLTSYGRGDWVPVKSSSPLEYTSSVYYYVDATILAKTAKLF
GKTEDAQFYSALADKIKKAINDKYLNQSTGIYGSGLQTELSVALQWGIVPAALQDKVASN
LAKRVAADGMHLDVGVLGAKAILNALSDHGQAETAYKLAAQDTYPSWGWWIVNGATTLYE
NWNIKAERDISLNHMMFGEIGGWFFKGLGGIKVDEKQPGFKNVILAPNFVTGLTHFEASH
DGPYGKIISSWKRKGEAVIYDVTIPANSTSTISFPIAGNKAVYYNGKKISQVYETGSGKY
QFEIR
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaagttttaccagaaaataagtattagctcttccctgtttttgatttttggttttagt
cctcttgcttttggaagtgccaaattcattgcaggtagttttgtggctccttttactcct
gaaattgtatcgcccggtggcttacaatgtgaacatttggtaaatccgatgggcattgat
gcaccaaaaccaaggctttcctggttgctttctgatacgtgccagggagccaggcaaact
gcttaccgggttatggtcgggacagattcatcggctttacttcagcagaaaaagattgta
tggaacacaggaaaggttaattcttctgccgctttacttctttataatggggatgtgtta
aaaccatttaccaaatatttctggcaggtagaagtttgggataaagatggaaaaccagga
accgccaggattgccagttttgaaactggaatggtaaaaatgtccaattggaaaggtacc
tggatcagtgaccggaatgaggtgaataccttacctgcgccatatttcagaaaggtattt
gaaagcccgaaaaagataaaatctgccagagcttatatcgcagcagcgggtttatatgaa
ctttatctgaacggtaaaaaagttggtaatcatcgtcttgacccaatgtatacccgtttt
gacagaaggaatttatatgtaagttacgatgtaaccgccaatttgcaggccggtaaaaat
gcaattggtgttttacttggaaatggatggtataatcaccagtctttagcggtgtggaat
tttgataaagcaccttggcgggcaaggccagcattttgcctggatttacggattacttat
caggatgggtctgaagaaacggttacttctgatggcagctggaaaacacatagcgggccg
ctggtttttaacagcatttatactgctgaacattatgatgcgcgtctggaacaacccgga
tggaataaggtagattttgacgccagtaaatggggagaggttaccttgcgtgcagcacca
tcaaagaatatagtcagccaggctatgcaccctatccgcagtattgaaactattccggcg
atatcggtaaagaaatttaacgatacaacttatgtttttgacctgggcagaaatattgca
ggggtcagcaagattaaagtaaaagggcaaagcgggacagtcatacaaatcaaacatggg
gaaagactgtatccggatggtcgccttgatctctccaatattgatgtttatcatcgcccg
gcagataaaaaagatccttttcaaacagatattttgatattgaatggaaaaggggaggag
gagtttatggccaggtttaactacaaaggatttcaatacgtggaggtcgtgagcagtaag
cctgtaacgttaactaaagaaagtattaccggatattttatgcatagtgatgttccggta
gctggtcagatcagttcttctaatcctttgattgataaattatggtgggcaacaaataat
tcatacttatcaaatttatatggttaccctacggattgtccgcagcgggaaaagaatggc
tggaccggggatggacatttcgctgtagaaacaggtttgtataattttgacgggatcact
gtttatgaaaaatggcttgctgaccaccgggatgagcagcagcccaatggggtattgcct
gatatcattcctactggtggctggggttatggtactgcaaacggaacggactggacgagt
acaattgctattattccgtgggatatttaccagttttacggagattctaaattattagca
gcttgttatgacaatatcaagagctatgtaaattatgttactcagatcagtccttctgga
ttaacgagttatggcagaggggactgggttcctgtcaagtcttcttcgccactagaatat
acttcttcagtttattattatgtagatgcgactattctggctaaaacagcaaagttgttt
ggcaaaaccgaggatgctcagttttatagtgcgctggctgataaaattaagaaagcaatc
aatgacaaatatctgaaccaatcgactgggatttatggtagtggtttgcaaacagaatta
agtgttgcattacagtggggcatcgttcctgcagcgcttcaggataaagtggcttccaat
ctggcaaaaagagtagcagcagatgggatgcacctggatgttggggtcttaggagctaaa
gcaattttgaatgcattaagtgatcatgggcaggcagaaactgcttataaactggcggct
caggatacttatccttcctggggttggtggattgtaaatggggcaacgacactttatgag
aattggaatattaaagcagaacgtgatatttctttgaaccatatgatgtttggagagatc
ggtggctggtttttcaaaggattgggaggaattaaagttgatgagaaacagcctggattt
aaaaatgtaattctggcgccaaattttgttacagggttaacgcattttgaagcgagccat
gatggaccgtatgggaaaatcatttcttcgtggaaaagaaaaggggaagcagttatatat
gacgtgaccattcctgcaaatagcacttcaacgatttcttttccaatagcaggaaataag
gctgtttattataatggcaaaaagatcagccaagtttatgaaaccggatctggtaaatat
cagttcgaaatccggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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