KEGG   Pedobacter cryoconitis: AY601_2244
Entry
AY601_2244        CDS       T04341                                 
Name
(GenBank) tRNA modification GTPase MnmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
pcm  Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcm03016]
    AY601_2244
Transfer RNA biogenesis [BR:pcm03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AY601_2244
 Prokaryotic type
   Methyltransferases
    AY601_2244
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Ras MMR_HSR1_Xtn GTP_EFTU Dynamin_N cobW Arf ABC_ATPase AAA_29 ABC_tran AIG1 FtsK_SpoIIIE SRPRB Roc
Other DBs
NCBI-ProteinID: AMP99139
UniProt: A0A127VD11
Position
complement(2682092..2683462)
AA seq 456 aa
MITNETIVALSTPPGAGAIGVIRLSGKDAIAIANSVFSGKDLLSQPTHTLHFGLIKDGDI
VIDEVVVSLFVGPKSYTKENVVEISCHGSNYIIQQIINLLIKKGASAAKPGEFTLRAFLN
GAMDLSQAEAVADLISSDSQAAHSVAMNQLRGGFSTELNVLREQLIHFASMIELELDFSE
EDVEFANRDQLQELINKITIVLNKLIRSFELGNVIKEGINTVIAGRPNAGKSTLLNALLN
EDRAIVSEIAGTTRDTIEEVLNINGINFRLIDTAGIREATDTIEAIGVEKTMLKISQSAV
LVYLFDVLNLTANEIRDDIASLYKPGLAFIAVANKIDLSFSDRLKELNLPSEIKFIGISA
KENQNVEELKELLYETVIGDKLSENHTMVTNIRHVEALRKTQESLDSVSQGLINPVTSDF
LATDIKQALYYLGEITGKVTTDDLLDNIFSKFCIGK
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgattacaaatgaaacaatagtagctttatcaaccccacctggagcgggtgccattggc
gtgatccgtttatctgggaaagatgctattgcgatcgcaaattccgtatttagcggaaag
gatctgttgagccaacctacacatacactgcattttggattgattaaagatggtgacatc
gtgattgatgaagtggtggtaagtttgttcgtaggcccaaaatcttacacgaaagaaaac
gtggtagagatctcttgccacggatcaaattatatcattcagcagattattaatttattg
ataaaaaaaggtgcttcagcagcgaaacctggagaattcactttaagagcgtttttgaat
ggtgcgatggatttatctcaggcagaagctgtagcggacttgatttcttcagattcacag
gctgcacatagtgttgcaatgaatcagttaaggggaggtttcagtacggaattaaatgtt
ttgcgtgaacagctgatccattttgcttccatgattgaattggagcttgatttttctgag
gaggatgtggagtttgcaaacagagatcaattgcaggaattaattaataagatcacgata
gtattgaataagctgatccgttcttttgaattgggtaatgtgattaaggaaggtatcaat
acggtgattgcaggcagaccgaatgcgggtaaatctactttgttgaatgcgttgttaaat
gaagatagggcaattgtcagtgagatcgcaggaacgacaagggatacaatagaggaagtt
ttaaatatcaatggtatcaactttcgattaattgatacggcgggcatacgcgaagcgaca
gacacgatagaagcgatcggagtagagaagacgatgttaaagattagtcagtctgctgtt
ttagtttatttgttcgatgtgctgaatttgacagcgaacgagattagggatgatatcgca
agtttatataaacctgggttggcttttattgcagtagcgaataagattgatttgtcattt
agtgacaggttgaaggagttgaatttaccttcagagattaagtttatcgggatatccgcg
aaggaaaatcaaaatgtggaggagttgaaggagttgttgtatgagactgtgataggggat
aagttgtcggagaatcataccatggttacgaatattagacatgtggaagcgttaaggaag
acgcaggagtcgttggatagcgtttcgcaagggttgattaacccggttacttcggatttt
ttggcaactgatattaagcaggcgctgtattatttaggggaaattactgggaaggttact
accgatgatttgttggataatatatttagtaagttttgtattgggaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (34)   

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