KEGG   Pedobacter cryoconitis: AY601_3161
Entry
AY601_3161        CDS       T04341                                 
Name
(GenBank) Phosphomethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00730  Thiamine metabolism
pcm01100  Metabolic pathways
pcm01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AY601_3161
Enzymes [BR:pcm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     AY601_3161
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated AMP-binding
Other DBs
NCBI-ProteinID: AMQ00033
UniProt: A0A127VFA1
Position
complement(3770818..3772701)
AA seq 627 aa
MKVEKIPDGQVISRTPFPASRKVFVKGELHAIEVAMREISLSETKIHNGFGLTETNPCVT
VYDTSGPYTDPNAHIDVKAGLPRIRESWVTDRGDVEKLDQITSAYGAQRLADPSLDQLRF
AFQHQPYRAKAGQNVSQMHYARKGIITPEMEYIAIRENQRIELWNNEKGEQAEAMSQQHA
GNSFGANTPKGFITPEFVRQEVACGRAVIPSNINHPESEPMIIGRNFLVKINANIGNSAV
TSSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNG
KAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRITGIVSRGGSIMAKWCLA
HHQESFLYTHFEEICEIMKAYDVAFSLGDGLRPGCLADANDAAQFAELETLGELTKIAWK
HDIQTIIEGPGHVPMHMIKENMEKQLEHCGEAPFYTLGPLTTDIAPGYDHITSAIGAAMI
GWYGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARF
EFRWEDQFNLSLDPDTAKEFHDETLPADGAKIAHFCSMCGPNFCSMKITQDVREYAAKQG
LDEAAALAKGMEDKSREFTEKGSEIYL
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgaaagtagaaaaaattccagatggccaggtcatcagcaggacgccattcccggcttcc
cgtaaagtttttgtaaaaggtgaacttcatgctattgaagtagccatgcgtgaaatcagc
cttagcgaaaccaaaatacataatggttttggcctgacagagacaaacccatgtgtaaca
gtttatgataccagcgggccttatacagatccgaatgcacatattgatgttaaagcaggg
ttgccacggatcagagaaagttgggttaccgatagaggtgacgttgaaaagctggatcag
attacctctgcttatggtgcacagcgattggcagacccatcacttgaccagttacgtttc
gcttttcagcatcaaccctatcgtgcaaaagcaggacagaatgtatctcagatgcattat
gccaggaaagggatcatcactccggaaatggaatatatcgcgatcagagaaaaccagagg
atagaactgtggaataatgaaaaaggagagcaggcagaggcgatgagtcagcagcatgca
ggaaatagctttggtgccaatacacctaagggcttcattacaccagaatttgtacgccag
gaagtcgcttgcgggagagctgttatcccctcaaatatcaaccaccctgaatctgaacca
atgattattggccggaatttcctggttaaaatcaacgcaaatattggtaactcagcagta
acttccagtattgaagaagaagttgaaaaggccgtatgggcatgtcgctggggtgctgac
accattatggatttatcaacaggtaaaaatatacatgaaacaagggagtggattattcgt
aattcaccagttccaatcgggacagttccaatttaccaggcactcgaaaaagtgaacggt
aaagctgaggatctgacctgggagctattccgggatacattaattgagcaggccgagcaa
ggggttgattattttaccatccatgccggagtattgctaagatatattccattgactgca
aaaaggattaccggtatagtttccagaggtggatcaatcatggcaaaatggtgtttggcg
catcatcaggagagcttcttgtacacacattttgaagaaatctgtgagatcatgaaagcc
tatgatgttgccttttcgttaggtgatggtttaagaccaggctgcctggcagatgcgaat
gatgcggcacagtttgctgagctggaaacattaggtgagctgactaaaattgcctggaag
catgatatacagactattattgaagggccgggccatgtaccgatgcatatgattaaagaa
aatatggaaaagcaactggaacattgcggtgaagctccattttatactttaggcccactc
acaactgacattgcacctggatatgatcatatcacttctgcaattggcgcagcgatgatt
ggctggtacggaacggcaatgttgtgttatgtgacgccaaaagaacacctgggcttaccc
aataaaaaagatgtaaaagacggggtaatcacttataaaattgctgcgcatgcggcagat
ttagcaaaaggacatcccggagctcaataccgtgataacgcattgagtaaagccaggttt
gaattccgatgggaagatcagtttaatctttcacttgatccggatactgcaaaggagttt
catgacgagacacttcctgccgatggtgctaaaatcgcccacttctgttccatgtgcgga
ccgaatttctgttctatgaaaatcacccaggacgtaagggaatatgcagctaaacaaggt
ttggacgaagctgcggcgcttgcaaaagggatggaagataaatcgcgtgaattcaccgaa
aaaggaagtgaaatatacctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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